RNA id: AMCG00011590


Basic Information

Item Value
RNA id AMCG00011590
length 447
RNA type mRNA
GC content 0.42
exon number 2
gene id AMCG00011590
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 373364 ~ 374190 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGTTGCCCTGCACGAATTCGCTCTGATTTAGGCACTGCTATATTGAACAGATGCAACAGTTTCTCAGGTATGATCATGGAGACGAATATTCAAGAAACTGTTACATTTATGGTTCAAGATGAATTGCAGAGATTAGTCCATCTGTGGATCACTCACAGGACTAGACTGAGCAGAAATGCAGTTGCACCAGATGGACGCCCTGTACTGATGCACAACCTACCACATCTTTATGGAGCCAGAGATCACTTAAAGGACGTCAgtcagcagcagctccttgtTTGCAGAGAGGAGTGCCTTCCTAGAGGACCATACCCTTGTGATAAAACAGATTTTGAATTATCTTGCTTCATTATGGGAGAGAATAATATGGACCCAGCCACAAATCCTGATGAAGCTATTgagttgtatttaattttgagaAATTGTATCCTAACACAGTTGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164469 lncRNA downstream 12761 360230 ~ 360603 (-) True G131244
TU164408 lncRNA downstream 160802 170453 ~ 212562 (-) False AMCG00011579
TU164344 lncRNA downstream 275535 96783 ~ 97829 (-) True G131152
TU164340 lncRNA downstream 308135 64893 ~ 65229 (-) True G131149
TU164296 lncRNA downstream 313267 53722 ~ 60097 (-) True G131114
TU164759 lncRNA upstream 85320 459510 ~ 755699 (-) True G131425
TU164765 lncRNA upstream 87220 461410 ~ 462697 (-) True G131426
TU164778 lncRNA upstream 175849 550039 ~ 560333 (-) True G131428
TU164788 lncRNA upstream 253141 627331 ~ 630425 (-) True G131437
TU164818 lncRNA upstream 291187 665377 ~ 666287 (-) True G131456
AMCG00011588 mRNA downstream 52736 314019 ~ 320628 (-) True AMCG00011588
AMCG00011589 mRNA downstream 69546 293452 ~ 303818 (-) True AMCG00011589
AMCG00011584 mRNA downstream 91223 280931 ~ 282141 (-) True AMCG00011584
AMCG00011582 mRNA downstream 105310 262391 ~ 268054 (-) True AMCG00011582
AMCG00011583 mRNA downstream 112773 254881 ~ 260591 (-) True AMCG00011583
AMCG00011594 mRNA upstream 238950 613140 ~ 619539 (-) True AMCG00011594
AMCG00011595 mRNA upstream 281230 655420 ~ 656305 (-) True AMCG00011595
AMCG00011599 mRNA upstream 312941 687131 ~ 691008 (-) True AMCG00011599
AMCG00011597 mRNA upstream 325628 699818 ~ 720407 (-) True AMCG00011597
AMCG00011598 mRNA upstream 348894 723084 ~ 731850 (-) True AMCG00011598
TU164448 other downstream 69449 302684 ~ 303915 (-) False AMCG00011589
TU164750 other upstream 40327 414517 ~ 415154 (-) True G131420
TU164816 other upstream 291187 665377 ~ 667310 (-) False G131456
TU164834 other upstream 338958 713148 ~ 720282 (-) False AMCG00011597
TU164850 other upstream 415829 790019 ~ 796419 (-) False AMCG00011601
TU165094 other upstream 1333527 1707717 ~ 1719226 (-) True AMCG00011645

Expression Profile