RNA id: AMCG00011667


Basic Information

Item Value
RNA id AMCG00011667
length 768
RNA type mRNA
GC content 0.61
exon number 7
gene id AMCG00011667
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2052011 ~ 2053551 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTCACCGAGGACTTGCTGGTGTACTCCAACACCCTGTTCTACATGCCGCCCGCCTCCCCCGGCGGCATCATCCGGATGAACAGCGCCCTCATCCCGCTCGAGTGCCACTATAACCGGATGGCCAATGTTAGCAGTGATCCCATAAAACCCACCTGGGTCCCTTTTACCTCCACCCGCTCTGCTGAAGATGTCCTGGATTTCTCCCTGCAGCTCATGACTGATGACTGGAGCTCCCAGAGGCCCTCCAACATCTTTTACCTGGGGGATATCCTGAACCTCGAGGCCTCCGTCAACCTGACGGGCCACCTGCCCCTGCGGCTGTTTGTGGACCGCTGTGTGGCCACCCTGGAGCCAAACCAGACTTCCTCCCCTAGCTATGCCTTCATTGAGAACCATGGGTGCTTCGTGGAATCCAAGGCCACCGGCTCCAGCTCGCGCTTCCTGCTGCGGCTCCAGGATTCTCGTCTCCGCATGCAGCTGGAGGCCTTCCGCTTCCACCAGGAAGCCCGCAGCTCCCTCTACATCACCTGCCACCTGACTGTGGCACTTGCCTCCCAGAGCAATGCCCAGAACAAGGCCTGCTCCTTTGTGCAGAGGTGGCAGTCTGTGGACGGCAGTGACCAGGTTTGCAGCTGCTGTGACTCCAGCTGTGACCCTGCCTCCAGGACCCGGGGCTCGAGGCGCTGGAGCAGAGGGGCCCCATCTTCAGATTCGGGGCTGGTCCAGGAGGCAGATGCCACTCTGGGCCCGTTCTTTATCATGGGCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU165243 lncRNA downstream 49819 2000409 ~ 2002192 (-) True G131756
TU165238 lncRNA downstream 103072 1947447 ~ 1948939 (-) True G131751
TU165222 lncRNA downstream 136461 1900593 ~ 1915550 (-) True G131741
TU165180 lncRNA downstream 172720 1866793 ~ 1879291 (-) True G131709
TU165339 lncRNA upstream 5228 2058779 ~ 2059607 (-) True G131833
TU165386 lncRNA upstream 181061 2234612 ~ 2236805 (-) True G131871
TU165389 lncRNA upstream 193220 2246771 ~ 2247129 (-) True G131873
TU165403 lncRNA upstream 224682 2278233 ~ 2278516 (-) True G131884
TU165378 lncRNA upstream 233318 2286869 ~ 2298484 (-) True G131864
AMCG00011666 mRNA downstream 20744 2022708 ~ 2031267 (-) True AMCG00011666
AMCG00011657 mRNA downstream 68925 1979158 ~ 1983086 (-) True AMCG00011657
AMCG00011660 mRNA downstream 111499 1936735 ~ 1940512 (-) True AMCG00011660
AMCG00011659 mRNA downstream 136165 1911644 ~ 1915846 (-) True AMCG00011659
AMCG00011658 mRNA downstream 147193 1902372 ~ 1904818 (-) True AMCG00011658
AMCG00011673 mRNA upstream 44097 2097648 ~ 2116839 (-) True AMCG00011673
AMCG00011672 mRNA upstream 101528 2155079 ~ 2180288 (-) True AMCG00011672
AMCG00011678 mRNA upstream 134702 2188253 ~ 2196227 (-) True AMCG00011678
AMCG00011679 mRNA upstream 144569 2198120 ~ 2199948 (-) True AMCG00011679
AMCG00011681 mRNA upstream 154270 2207821 ~ 2213289 (-) True AMCG00011681
TU165094 other downstream 332785 1707717 ~ 1719226 (-) True AMCG00011645
TU165095 other downstream 332785 1707717 ~ 1719226 (-) False AMCG00011645
TU164850 other downstream 1255592 790019 ~ 796419 (-) False AMCG00011601
TU164834 other downstream 1331729 713148 ~ 720282 (-) False AMCG00011597
TU164816 other downstream 1384701 665377 ~ 667310 (-) False G131456
TU165376 other upstream 240082 2293633 ~ 2296453 (-) True G131863
TU165669 other upstream 407556 2461107 ~ 2461750 (-) True G132117
TU165693 other upstream 513194 2566745 ~ 2577837 (-) True G132140
TU165695 other upstream 513194 2566745 ~ 2577837 (-) False G132140
TU165699 other upstream 559928 2613479 ~ 2614515 (-) False AMCG00011711

Expression Profile