RNA id: AMCG00011691


Basic Information

Item Value
RNA id AMCG00011691
length 701
RNA type mRNA
GC content 0.57
exon number 5
gene id AMCG00011691
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2362204 ~ 2365994 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TCACAGTGAGAGCTGCAAGTACAGAACTGCACAGAAACACTGCGTGCATATCGGCGCTGTACCTTCACCTATAGTAACGCAACGTCATATCCCGGTGTGAcggattgttttattttaccttgTGGTACCCAAAAGTTTCGTTTAGGGTTTGCATGGCTGCTCCAGGAGCGATGATGTCACAGCCGGGCGCCGTGGTGGTGCAGCAGGTGACCAGCGCCCAGAGAAGCGACACCTGGAACTCGGGCATCTGCGACTGCTTCGACGACATGGGCATCTGCTGCTGCGGGACGTTCTGCCTGCCCTGCCTGGCGTGCCAGACCGCCACAGACATGGGCGAGAGCTGCTGCCTTCCCTGGCTGCTGCCCGGCACAGGAGAGATCGCCATGCGGACGGCCATCCGGGAGAGATACGGCATCCGGggCAACATCCTGGATGATGCCTCCATGCTGTGCTGGTGCCACTGCTGCACCCTTTGCCAAATGGCCCGAGAGGTCCGGGTCAGGAAGAACATGATCAACGTCCACACGTCCACCACCACTGCCTACGCCCCTGTGTCTCAGTACTAGTCGCCCCAGGGCCGTGGAATGGCCGAGCTGAGAGGTGGAGGCGGTACAACACCTCCCAAGGCAGACTTCCactcttcctttaaaaaaaaaaaatataacaaataaaatcaggGCTGTTCCACCTGCTGGCTGACT

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU165437 lncRNA downstream 33222 2328597 ~ 2328982 (-) True G131913
TU165433 lncRNA downstream 34496 2327127 ~ 2327708 (-) True G131909
TU165428 lncRNA downstream 42206 2317940 ~ 2319998 (-) True G131905
TU165378 lncRNA downstream 63720 2286869 ~ 2298484 (-) True G131864
TU165624 lncRNA upstream 49489 2415483 ~ 2447423 (-) True G132078
TU165668 lncRNA upstream 93754 2459748 ~ 2459961 (-) True G132116
TU165679 lncRNA upstream 126349 2492343 ~ 2499180 (-) True G132126
TU165682 lncRNA upstream 145509 2511503 ~ 2515213 (-) True G132129
TU165690 lncRNA upstream 184462 2550456 ~ 2551120 (-) True G132137
AMCG00011693 mRNA downstream 3860 2355679 ~ 2358344 (-) True AMCG00011693
AMCG00011690 mRNA downstream 24351 2336665 ~ 2337853 (-) True AMCG00011690
AMCG00011692 mRNA downstream 44616 2313629 ~ 2317588 (-) True AMCG00011692
AMCG00011683 mRNA downstream 89398 2268583 ~ 2272806 (-) True AMCG00011683
AMCG00011682 mRNA downstream 94015 2267971 ~ 2268189 (-) True AMCG00011682
AMCG00011697 mRNA upstream 21618 2387612 ~ 2393372 (-) True AMCG00011697
AMCG00011698 mRNA upstream 37977 2403971 ~ 2416596 (-) True AMCG00011698
AMCG00011699 mRNA upstream 102234 2468228 ~ 2473307 (-) True AMCG00011699
AMCG00011700 mRNA upstream 115097 2481091 ~ 2485730 (-) True AMCG00011700
AMCG00011703 mRNA upstream 130070 2496064 ~ 2510692 (-) True AMCG00011703
TU165376 other downstream 65751 2293633 ~ 2296453 (-) True G131863
TU165094 other downstream 642978 1707717 ~ 1719226 (-) True AMCG00011645
TU165095 other downstream 642978 1707717 ~ 1719226 (-) False AMCG00011645
TU164850 other downstream 1565785 790019 ~ 796419 (-) False AMCG00011601
TU164834 other downstream 1641922 713148 ~ 720282 (-) False AMCG00011597
TU165669 other upstream 95113 2461107 ~ 2461750 (-) True G132117
TU165693 other upstream 200751 2566745 ~ 2577837 (-) True G132140
TU165695 other upstream 200751 2566745 ~ 2577837 (-) False G132140
TU165699 other upstream 247485 2613479 ~ 2614515 (-) False AMCG00011711
TU165709 other upstream 276760 2642754 ~ 2643456 (-) True AMCG00011708

Expression Profile