Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011781 |
| length | 1219 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | AMCG00011781 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 4175435 ~ 4181132 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU166266 | lncRNA | upstream | 63505 | 4109513 ~ 4111930 (+) | True | G132596 |
| TU166255 | lncRNA | upstream | 157679 | 4016127 ~ 4017756 (+) | True | G132586 |
| TU166241 | lncRNA | upstream | 179706 | 3990427 ~ 3995729 (+) | True | G132573 |
| TU166243 | lncRNA | upstream | 182531 | 3992264 ~ 3992904 (+) | True | G132574 |
| TU166220 | lncRNA | upstream | 197773 | 3903675 ~ 3977662 (+) | False | AMCG00011771 |
| TU166337 | lncRNA | downstream | 37415 | 4218547 ~ 4218983 (+) | True | G132655 |
| TU166343 | lncRNA | downstream | 78412 | 4259544 ~ 4322290 (+) | True | G132660 |
| TU166417 | lncRNA | downstream | 571590 | 4752722 ~ 4752923 (+) | True | G132722 |
| TU166421 | lncRNA | downstream | 582557 | 4763689 ~ 4763888 (+) | True | G132726 |
| TU166429 | lncRNA | downstream | 594022 | 4775154 ~ 4775539 (+) | True | G132734 |
| AMCG00011782 | mRNA | upstream | 2758 | 4164833 ~ 4172677 (+) | True | AMCG00011782 |
| AMCG00011777 | mRNA | upstream | 200296 | 3970320 ~ 3975139 (+) | True | AMCG00011777 |
| AMCG00011776 | mRNA | upstream | 210252 | 3947402 ~ 3965183 (+) | True | AMCG00011776 |
| AMCG00011771 | mRNA | upstream | 232536 | 3930635 ~ 3942899 (+) | True | AMCG00011771 |
| AMCG00011774 | mRNA | upstream | 252809 | 3919669 ~ 3922626 (+) | True | AMCG00011774 |
| AMCG00011785 | mRNA | downstream | 62040 | 4243172 ~ 4249417 (+) | True | AMCG00011785 |
| AMCG00011793 | mRNA | downstream | 412828 | 4593960 ~ 4601353 (+) | True | AMCG00011793 |
| AMCG00011794 | mRNA | downstream | 465178 | 4646310 ~ 4648415 (+) | True | AMCG00011794 |
| AMCG00011796 | mRNA | downstream | 502544 | 4683676 ~ 4697341 (+) | True | AMCG00011796 |
| AMCG00011795 | mRNA | downstream | 538682 | 4719814 ~ 4721921 (+) | True | AMCG00011795 |
| TU166232 | other | upstream | 232073 | 3941933 ~ 3943362 (+) | False | AMCG00011771 |
| TU166218 | other | upstream | 237043 | 3903675 ~ 3938392 (+) | False | AMCG00011771 |
| TU166214 | other | upstream | 279256 | 3892381 ~ 3896179 (+) | False | AMCG00011770 |
| TU165868 | other | upstream | 970838 | 3201374 ~ 3204597 (+) | True | G132271 |
| TU165804 | other | upstream | 1170773 | 3001432 ~ 3004662 (+) | True | G132221 |
| TU166792 | other | downstream | 1578726 | 5759858 ~ 5761248 (+) | True | AMCG00011830 |
| TU166858 | other | downstream | 1647669 | 5828801 ~ 5829532 (+) | True | G133059 |
| TU166896 | other | downstream | 1705873 | 5887005 ~ 5887892 (+) | False | AMCG00011837 |
| TU166897 | other | downstream | 1705873 | 5887005 ~ 5887892 (+) | False | AMCG00011837 |
| TU167105 | other | downstream | 2074818 | 6255950 ~ 6256682 (+) | False | AMCG00011876 |
