RNA id: AMCG00011849


Basic Information

Item Value
RNA id AMCG00011849
length 297
RNA type mRNA
GC content 0.55
exon number 3
gene id AMCG00011849
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5750468 ~ 5758838 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGAGGGAGCTGGAGAACGAGCTGGAGGCAGAACAAAAGAAGAGCACAGAATGTGTGAAGGGAGTCCGCAAATACGAGAGACGTGTCAAGGAGCTCACCTACCAGACGGAGGAGGACCGTAAGAATATAATCCGTCTGCAGGACCTGGTGGACAAGCTGCAGCTGAAGGTGAAGGCCTACAAGAGGTCTGCTGAGGAAGCTAGCTGCCCTTGGTGTGGGACTGAGCTGCTAGAGTCAGAGCAGAGCTGGGTGGATGAGTGGATAGCGTCCACATCAGAGATGGAGAGTGGAGGCAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU166824 lncRNA downstream 16591 5733094 ~ 5733877 (-) False G133032
TU166732 lncRNA downstream 118942 5631094 ~ 5631526 (-) True G132977
TU166640 lncRNA downstream 421744 5306497 ~ 5328724 (-) True AMCG00011812
TU166644 lncRNA downstream 424546 5290174 ~ 5325922 (-) False AMCG00011812
TU166578 lncRNA downstream 586657 5162185 ~ 5163811 (-) True G132862
TU166875 lncRNA upstream 95099 5853937 ~ 5854156 (-) True G133076
TU166879 lncRNA upstream 97825 5856663 ~ 5857165 (-) True G133080
TU166883 lncRNA upstream 101558 5860396 ~ 5860689 (-) False AMCG00011842
TU166884 lncRNA upstream 102286 5861124 ~ 5865887 (-) False AMCG00011842
TU166959 lncRNA upstream 137901 5896739 ~ 5897003 (-) True G133147
AMCG00011845 mRNA downstream 5296 5741761 ~ 5745172 (-) True AMCG00011845
AMCG00011843 mRNA downstream 10416 5735029 ~ 5740052 (-) True AMCG00011843
AMCG00011831 mRNA downstream 30320 5707393 ~ 5720148 (-) True AMCG00011831
AMCG00011833 mRNA downstream 54324 5692054 ~ 5696144 (-) True AMCG00011833
AMCG00011832 mRNA downstream 69862 5658789 ~ 5680606 (-) True AMCG00011832
AMCG00011844 mRNA upstream 3740 5762578 ~ 5764790 (-) True AMCG00011844
AMCG00011846 mRNA upstream 20651 5779489 ~ 5797225 (-) True AMCG00011846
AMCG00011840 mRNA upstream 43457 5802295 ~ 5810650 (-) True AMCG00011840
AMCG00011847 mRNA upstream 53137 5811975 ~ 5818663 (-) True AMCG00011847
AMCG00011848 mRNA upstream 67198 5826036 ~ 5833355 (-) True AMCG00011848
TU166828 other downstream 29487 5718578 ~ 5720981 (-) False AMCG00011831
TU166823 other downstream 40935 5707283 ~ 5709533 (-) False G133032
TU166801 other downstream 46551 5701086 ~ 5703917 (-) True G133026
TU166568 other downstream 603663 5142465 ~ 5146805 (-) False AMCG00011811
TU166493 other downstream 745859 5004165 ~ 5004609 (-) True G132788
TU166874 other upstream 93042 5851880 ~ 5852590 (-) True G133075
TU166988 other upstream 196449 5955287 ~ 5957925 (-) True AMCG00011860
TU167012 other upstream 233576 5992414 ~ 5993018 (-) True G133183
TU167038 other upstream 319532 6078370 ~ 6079367 (-) True G133208
TU167095 other upstream 466682 6225520 ~ 6227193 (-) False AMCG00011886

Expression Profile