RNA id: AMCG00011994



Basic Information


Item Value
RNA id AMCG00011994
length 279
RNA type mRNA
GC content 0.55
exon number 4
gene id AMCG00011994
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8020804 ~ 8025061 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGCCACTGGTGGAGGTCGGGCTGCACATAAAGGTGAACACCCACCGGCAAGTGTTTGCCAAGCTTCCCCCCCTCTTGGAAAGGACCCAAGCCAATGCTGAGCCTGACATCAGAGTCCTGCGCATCTTCCCAGTCCTACaTGATGAAGAtaagtctctgtggagagatgACCGTCTTAGCAGAGCCCaagCCCAAACCCCATCCCACTGTGTCCCTTCCACTCCCGCTGACATCGCTCCTCcataccccccccacaccaatgtgtacaaaaaataa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU167871 lncRNA upstream 17292 8002780 ~ 8003512 (+) True G133820
TU167857 lncRNA upstream 94578 7925136 ~ 7926226 (+) False AMCG00011987
TU167816 lncRNA upstream 177333 7830564 ~ 7843471 (+) True G133783
TU167649 lncRNA upstream 445639 7551295 ~ 7575165 (+) True G133665
TU167674 lncRNA upstream 464092 7545283 ~ 7556712 (+) True G133681
TU167877 lncRNA downstream 37532 8062593 ~ 8117249 (+) True G133825
TU167884 lncRNA downstream 54694 8079755 ~ 8100437 (+) True G133832
TU167885 lncRNA downstream 95838 8120899 ~ 8124699 (+) True G133833
TU168009 lncRNA downstream 171758 8196819 ~ 8197029 (+) True G133921
TU168042 lncRNA downstream 251314 8276375 ~ 8276580 (+) True G133947
AMCG00011992 mRNA upstream 3917 7999228 ~ 8016887 (+) True AMCG00011992
AMCG00011986 mRNA upstream 44707 7970457 ~ 7976097 (+) True AMCG00011986
AMCG00011985 mRNA upstream 65791 7931795 ~ 7955013 (+) True AMCG00011985
AMCG00011987 mRNA upstream 92566 7925593 ~ 7928238 (+) True AMCG00011987
AMCG00011980 mRNA upstream 136543 7878175 ~ 7884261 (+) True AMCG00011980
AMCG00011993 mRNA downstream 4425 8029486 ~ 8037681 (+) True AMCG00011993
AMCG00012006 mRNA downstream 353272 8378333 ~ 8397041 (+) True AMCG00012006
AMCG00012005 mRNA downstream 372965 8398026 ~ 8401203 (+) True AMCG00012005
AMCG00012004 mRNA downstream 400959 8426020 ~ 8428680 (+) True AMCG00012004
AMCG00012007 mRNA downstream 439144 8464205 ~ 8468828 (+) True AMCG00012007
TU167842 other upstream 49886 7960698 ~ 7970918 (+) False AMCG00011986
TU167660 other upstream 454458 7565387 ~ 7566346 (+) False AMCG00011971
TU167659 other upstream 454776 7564808 ~ 7566028 (+) False AMCG00011971
TU167656 other upstream 512053 7505082 ~ 7508751 (+) True G133667
TU167596 other upstream 778504 7236941 ~ 7242300 (+) True G133619
TU167865 other downstream 3002 8028063 ~ 8032609 (+) False AMCG00011993
TU167873 other downstream 27063 8052124 ~ 8055021 (+) True G133822
TU168052 other downstream 358052 8383113 ~ 8387097 (+) False AMCG00012006
TU168076 other downstream 492953 8518014 ~ 8519026 (+) False AMCG00012008
TU168082 other downstream 535981 8561042 ~ 8563214 (+) True G133974

Expression Profile