RNA id: AMCG00012032



Basic Information


Item Value
RNA id AMCG00012032
length 369
RNA type mRNA
GC content 0.51
exon number 4
gene id AMCG00012032
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8990396 ~ 8995174 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAACAGAGCCAACCCTACTACACTGCACTTCTGACCTTCAGGTGTCAAATTGCACTCAAGGAACCACTAGAGTACAATGTTCCGAGCCCCCGAAGCCCAGGTCCGCTGATTGTCTGCGCCGCTCTGGGGGCTCTGGTGTTCATGGTGGCCGTCCTGGCTCTTGTGCAGACGCTGTGTTACAGAGACCTGAAGAAAGCCAGTCTGCCTGCCAGTGAGGATGACTATGATGATGTGAAAGATGAGGAAGACATCTCAGTACCAGaaataaagaaagagccCCCAGGAAAATCCTCTCCAGACTTGGACTACCATGGATATGAAGAGGTGGAAGAGCCTGAAGTGAAAGAGGCTGAGAAGCTTAACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168230 lncRNA upstream 101450 8888717 ~ 8888946 (+) True G134084
TU168209 lncRNA upstream 187518 8802523 ~ 8802878 (+) True G134068
TU168168 lncRNA upstream 286428 8703749 ~ 8703968 (+) True G134035
TU168167 lncRNA upstream 287798 8702349 ~ 8702598 (+) True G134034
TU168166 lncRNA upstream 289778 8699411 ~ 8700618 (+) True G134033
TU168296 lncRNA downstream 199388 9194562 ~ 9195917 (+) True G134141
TU168335 lncRNA downstream 285711 9280885 ~ 9309931 (+) False AMCG00012043
TU168426 lncRNA downstream 406280 9401454 ~ 9414917 (+) True G134222
TU168454 lncRNA downstream 539140 9534314 ~ 9538974 (+) True G134236
TU168453 lncRNA downstream 539171 9534345 ~ 9538864 (+) False G134236
AMCG00012030 mRNA upstream 279 8970106 ~ 8990117 (+) True AMCG00012030
AMCG00012026 mRNA upstream 33679 8951864 ~ 8956717 (+) True AMCG00012026
AMCG00012025 mRNA upstream 38539 8939418 ~ 8951857 (+) True AMCG00012025
AMCG00012021 mRNA upstream 61683 8921908 ~ 8928713 (+) True AMCG00012021
AMCG00012024 mRNA upstream 79425 8902296 ~ 8910971 (+) True AMCG00012024
AMCG00012028 mRNA downstream 26849 9022023 ~ 9022669 (+) True AMCG00012028
AMCG00012031 mRNA downstream 47624 9042798 ~ 9063605 (+) True AMCG00012031
AMCG00012029 mRNA downstream 81205 9076379 ~ 9077758 (+) True AMCG00012029
AMCG00012038 mRNA downstream 119466 9114640 ~ 9125053 (+) True AMCG00012038
AMCG00012037 mRNA downstream 129927 9125101 ~ 9145534 (+) True AMCG00012037
TU168082 other upstream 427182 8561042 ~ 8563214 (+) True G133974
TU168076 other upstream 471370 8518014 ~ 8519026 (+) False AMCG00012008
TU168052 other upstream 603299 8383113 ~ 8387097 (+) False AMCG00012006
TU167873 other upstream 935375 8052124 ~ 8055021 (+) True G133822
TU167865 other upstream 957787 8028063 ~ 8032609 (+) False AMCG00011993
TU168537 other downstream 656175 9651349 ~ 9653234 (+) True G134291
TU168543 other downstream 661183 9656357 ~ 9656727 (+) True G134295
TU168605 other downstream 857716 9852890 ~ 9867143 (+) True G134338
TU168607 other downstream 940752 9935926 ~ 9936411 (+) True G134340
TU168629 other downstream 1039012 10034186 ~ 10034693 (+) True G134357

Expression Profile