RNA id: AMCG00012046



Basic Information


Item Value
RNA id AMCG00012046
length 600
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00012046
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9265009 ~ 9265814 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGCCAATCAGAGGCTCCCCTCCAGTGCTGGTCAATGGAATCCTGGGAGAGTCGGTTGTCCTGCCTTCAGGGCTCGACGAGGGAACCTACAGCTCTGCCAGCCCAGTCCTGGTGATTTGGACAAAAGACTGGGAGATTCTAAGTCGTTTctataataatgaaaatcatgTATGGCCTACATTACTTGCTGATAGACTGAGTTTTGTCACAAAAGACGGTTCTCTGGCCATCAGTTCTCTGAAAGCTGAAGACAGAGGAAATTATATGTTCATTGGAGATGGATCTTTAGGCCAGTTCCCTGGAAACAATATAACTCTTCATGTGTATGAGAGGATCAGATTGGTGCAAATACAATCACAGCAGAGCTACGGGACAGACAACAAAACCTGCCACTTGACTTTAAACTGCACTGTGACGGGTGGCAGCCAGGTTGATCTAATTTGGCTGAAAGGCAAGAACAAGAATCCAGAAGAAACAAAGCAATCGGTTCTGCAGTTGACTGTTAAACCTACAGATGATGATTATTCCTACACCTGTGTCGCCTCCAATCCTGTCAGCAATTGGTCTGATACTATTGAGGGTAATGAGTGCTACACACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168296 lncRNA upstream 69092 9194562 ~ 9195917 (+) True G134141
TU168230 lncRNA upstream 376063 8888717 ~ 8888946 (+) True G134084
TU168209 lncRNA upstream 462131 8802523 ~ 8802878 (+) True G134068
TU168168 lncRNA upstream 561041 8703749 ~ 8703968 (+) True G134035
TU168167 lncRNA upstream 562411 8702349 ~ 8702598 (+) True G134034
TU168335 lncRNA downstream 15071 9280885 ~ 9309931 (+) False AMCG00012043
TU168426 lncRNA downstream 135640 9401454 ~ 9414917 (+) True G134222
TU168454 lncRNA downstream 268500 9534314 ~ 9538974 (+) True G134236
TU168453 lncRNA downstream 268531 9534345 ~ 9538864 (+) False G134236
TU168499 lncRNA downstream 301466 9567280 ~ 9571718 (+) True G134259
AMCG00012044 mRNA upstream 8809 9241689 ~ 9256200 (+) True AMCG00012044
AMCG00012041 mRNA upstream 27733 9223227 ~ 9237276 (+) True AMCG00012041
AMCG00012042 mRNA upstream 61272 9195997 ~ 9203737 (+) True AMCG00012042
AMCG00012035 mRNA upstream 87113 9168918 ~ 9177896 (+) True AMCG00012035
AMCG00012036 mRNA upstream 100362 9160818 ~ 9164647 (+) True AMCG00012036
AMCG00012047 mRNA downstream 6260 9272074 ~ 9273616 (+) True AMCG00012047
AMCG00012043 mRNA downstream 14174 9279988 ~ 9286206 (+) True AMCG00012043
AMCG00012048 mRNA downstream 39731 9305545 ~ 9307807 (+) True AMCG00012048
AMCG00012049 mRNA downstream 45608 9311422 ~ 9318636 (+) True AMCG00012049
AMCG00012052 mRNA downstream 172513 9438327 ~ 9440627 (+) True AMCG00012052
TU168082 other upstream 701795 8561042 ~ 8563214 (+) True G133974
TU168076 other upstream 745983 8518014 ~ 8519026 (+) False AMCG00012008
TU168052 other upstream 877912 8383113 ~ 8387097 (+) False AMCG00012006
TU167873 other upstream 1209988 8052124 ~ 8055021 (+) True G133822
TU167865 other upstream 1232400 8028063 ~ 8032609 (+) False AMCG00011993
TU168537 other downstream 385535 9651349 ~ 9653234 (+) True G134291
TU168543 other downstream 390543 9656357 ~ 9656727 (+) True G134295
TU168605 other downstream 587076 9852890 ~ 9867143 (+) True G134338
TU168607 other downstream 670112 9935926 ~ 9936411 (+) True G134340
TU168629 other downstream 768372 10034186 ~ 10034693 (+) True G134357

Expression Profile