RNA id: AMCG00012051



Basic Information


Item Value
RNA id AMCG00012051
length 215
RNA type mRNA
GC content 0.36
exon number 2
gene id AMCG00012051
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9291483 ~ 9297574 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCATGGGCACTGAGATCCCTGCCATTGAGCTCTATGGATTAAAAGGAGACTCTATTGGTCTTGAAGTACAAGGACAGGAACAGCTTCAGTTAAAAAGTATTTCATGGAAGTTTAACAAAATCAACATAGTGGAATACATCATTCATTTTGATTATGTTGATTATGATGATACATACAAGCACAGAGTGGACTACATTACAACTAACAAGAActac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168298 lncRNA downstream 100191 9154436 ~ 9191292 (-) True G134143
TU168210 lncRNA downstream 488497 8802407 ~ 8802986 (-) True G134069
TU168111 lncRNA downstream 807826 8430988 ~ 8483657 (-) True G133997
TU168002 lncRNA downstream 1102790 8188289 ~ 8188693 (-) True G133915
TU167983 lncRNA downstream 1231607 8047229 ~ 8059876 (-) False AMCG00011995
TU168438 lncRNA upstream 116742 9414316 ~ 9416458 (-) True G134226
TU168546 lncRNA upstream 358782 9656356 ~ 9656645 (-) True G134298
TU168676 lncRNA upstream 494736 9792310 ~ 9799446 (-) True G134396
TU168678 lncRNA upstream 512224 9809798 ~ 10182061 (-) False G134397
TU168689 lncRNA upstream 555327 9852901 ~ 10344049 (-) False G134402
AMCG00012045 mRNA downstream 95774 9178467 ~ 9195709 (-) True AMCG00012045
AMCG00012039 mRNA downstream 142088 9146127 ~ 9149395 (-) True AMCG00012039
AMCG00012040 mRNA downstream 173161 9088852 ~ 9118322 (-) True AMCG00012040
AMCG00012034 mRNA downstream 218970 9062571 ~ 9072513 (-) True AMCG00012034
AMCG00012033 mRNA downstream 289100 9000702 ~ 9002383 (-) True AMCG00012033
AMCG00012050 mRNA upstream 24037 9321611 ~ 9333991 (-) True AMCG00012050
AMCG00012054 mRNA upstream 63454 9361028 ~ 9372681 (-) True AMCG00012054
AMCG00012053 mRNA upstream 86852 9384426 ~ 9398409 (-) True AMCG00012053
AMCG00012068 mRNA upstream 254987 9552561 ~ 9553607 (-) True AMCG00012068
AMCG00012066 mRNA upstream 257619 9555193 ~ 9556954 (-) True AMCG00012066
TU168269 other downstream 146188 9140824 ~ 9145295 (-) True G134119
TU168169 other downstream 589842 8699411 ~ 8701641 (-) True G134036
TU168124 other downstream 726219 8489200 ~ 8565264 (-) True G134005
TU167732 other downstream 1734775 7545355 ~ 7556708 (-) True G133715
TU167712 other downstream 1746378 7543575 ~ 7545105 (-) False G133712
TU168464 other upstream 237694 9535268 ~ 9538892 (-) True G134244
TU168522 other upstream 315336 9612910 ~ 9625601 (-) False AMCG00012058
TU168523 other upstream 315336 9612910 ~ 9625601 (-) False AMCG00012058
TU168524 other upstream 315336 9612910 ~ 9625601 (-) False AMCG00012058
TU168674 other upstream 493267 9790841 ~ 9791348 (-) True G134395

Expression Profile