RNA id: AMCG00012073


Basic Information

Item Value
RNA id AMCG00012073
length 612
RNA type mRNA
GC content 0.50
exon number 4
gene id AMCG00012073
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9970993 ~ 9975251 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTTTGTGCCCAGATCCTCCTCTCTATCAGCCATCAGACACAGCCTGTGCTGACCTTGCACTCCTCAAATGGGACAATTTTTGAAGGCGATGCAGTGACATTGGAGTGTGTGTTTGATGGAGACCCTCTTGTCTGGCAATATAGATGGTATAGAGGCAAACATCTTTACTGGTTAATTGACAACAATCCAAGCCTAACCATCAACCCAGTTACAGTGTCTCACAGTGGGGATTACAGATGTCGTGCTGCCAGAAGACAAAACCCATCCGATATATTTGACAGCAACTCTGTTAAGTTACAAGTGTTTgTGCTGTTTGGGATCCCTTCCCTGTCCATTCAGCCCTGGCAGGCACTCTGGGAGGGAGAGACGGTGACTCTGTCCTGTCAGACTCAGTTACACACAAAGAGGCGAGACACAGTTCTCCAGTACCGTTTCCTGAAAGGACAGGAGATAATAACCCCTCCAGGGTCACTGGCGCACCACTCTATCCAGACAGTGAGGCCTGCAGACTCGGGGGTGTATCAGTGTGAAGTGAGAGCAGGACGGGTGAGGAAGATCAGCGCTGGACTACAGCTGACAGTGACAGACTTAGCAGCTAAAAAGAAGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU168696 lncRNA downstream 24504 9936100 ~ 9946489 (-) True G134405
TU168692 lncRNA downstream 103855 9852901 ~ 9867138 (-) False G134402
TU168676 lncRNA downstream 171547 9792310 ~ 9799446 (-) True G134396
TU168546 lncRNA downstream 314348 9656356 ~ 9656645 (-) True G134298
TU168438 lncRNA downstream 554535 9414316 ~ 9416458 (-) True G134226
TU168695 lncRNA upstream 225551 10200802 ~ 10201225 (-) True G134404
TU168743 lncRNA upstream 250376 10225627 ~ 10287129 (-) True G134443
TU168754 lncRNA upstream 328318 10303569 ~ 10306027 (-) True G134451
TU168688 lncRNA upstream 369811 10345062 ~ 10347725 (-) True G134402
TU169026 lncRNA upstream 992025 10967276 ~ 10971088 (-) False G134648
AMCG00012072 mRNA downstream 80247 9886410 ~ 9890746 (-) True AMCG00012072
AMCG00012070 mRNA downstream 196952 9768512 ~ 9774041 (-) True AMCG00012070
AMCG00012071 mRNA downstream 222441 9748269 ~ 9748552 (-) True AMCG00012071
AMCG00012059 mRNA downstream 282312 9682673 ~ 9688681 (-) True AMCG00012059
AMCG00012063 mRNA downstream 314966 9651257 ~ 9656027 (-) True AMCG00012063
AMCG00012077 mRNA upstream 69369 10044620 ~ 10061469 (-) True AMCG00012077
AMCG00012080 mRNA upstream 105465 10080716 ~ 10092937 (-) True AMCG00012080
AMCG00012081 mRNA upstream 230221 10205472 ~ 10206762 (-) True AMCG00012081
AMCG00012085 mRNA upstream 391838 10367089 ~ 10436690 (-) True AMCG00012085
AMCG00012093 mRNA upstream 590959 10566210 ~ 10582453 (-) True AMCG00012093
TU168694 other downstream 12120 9958245 ~ 9958873 (-) True G134403
TU168706 other downstream 14633 9955851 ~ 9956360 (-) True G134411
TU168683 other downstream 122887 9847541 ~ 9848106 (-) True G134400
TU168674 other downstream 179645 9790841 ~ 9791348 (-) True G134395
TU168522 other downstream 345392 9612910 ~ 9625601 (-) False AMCG00012058
TU168679 other upstream 175230 10150481 ~ 10244924 (-) False G134397
TU168732 other upstream 179414 10154665 ~ 10155208 (-) True G134435
TU168697 other upstream 201669 10176920 ~ 10223219 (-) True G134406
TU168739 other upstream 236891 10212142 ~ 10230443 (-) True G134441
TU168677 other upstream 269170 10244421 ~ 10244924 (-) True G134397

Expression Profile