RNA id: AMCG00012082



Basic Information


Item Value
RNA id AMCG00012082
length 297
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00012082
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10265100 ~ 10280532 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATCAGTGAAACGAATGAGGGAAAGGGGCATCTGGCTCTCACGCACCTGCCTTTAGCTCCCTCGCCTATGGTCAAGGGCGTTCTGTCTTCCACCATGGAGCACACAGACTCTCCTCTATGCAAAGCCAGCGGCCGCTCCTCCTTACTTAACCGGCAGCTGCGGCTCTTCTGTGGATCAGCAGGTCTCCAGCCAGTCTCTCAGAAACAGGCAACACTGAGCTCTGTGGGAACGATGCTGCCCGTACTTCTGTTTCTGTGGCTGACGGCTGCACCTCGTGAGTTCAAACTAGTCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168643 lncRNA upstream 20371 10194394 ~ 10244729 (+) True G134369
TU168606 lncRNA upstream 64130 10199151 ~ 10200970 (+) True G134339
TU168619 lncRNA upstream 84393 9958351 ~ 10180707 (+) False G134350
TU168621 lncRNA upstream 87872 9958351 ~ 10177228 (+) True G134350
TU168608 lncRNA upstream 318611 9927912 ~ 9946489 (+) True G134341
TU168804 lncRNA downstream 314317 10594849 ~ 10595406 (+) True G134495
TU168807 lncRNA downstream 318007 10598539 ~ 10598841 (+) True G134498
TU168833 lncRNA downstream 352976 10633508 ~ 10684097 (+) True AMCG00012088
TU168877 lncRNA downstream 569326 10849858 ~ 10853291 (+) True G134556
TU168958 lncRNA downstream 653183 10933715 ~ 10935107 (+) False G134613
AMCG00012078 mRNA upstream 164644 10098148 ~ 10100456 (+) True AMCG00012078
AMCG00012079 mRNA upstream 190358 10067556 ~ 10074742 (+) True AMCG00012079
AMCG00012074 mRNA upstream 248909 10014844 ~ 10016191 (+) True AMCG00012074
AMCG00012076 mRNA upstream 261009 9999738 ~ 10004091 (+) True AMCG00012076
AMCG00012075 mRNA upstream 265371 9979890 ~ 9999729 (+) True AMCG00012075
AMCG00012083 mRNA downstream 58296 10338828 ~ 10353743 (+) True AMCG00012083
AMCG00012084 mRNA downstream 83424 10363956 ~ 10392598 (+) True AMCG00012084
AMCG00012087 mRNA downstream 262881 10543413 ~ 10545945 (+) True AMCG00012087
AMCG00012086 mRNA downstream 271138 10551670 ~ 10564853 (+) True AMCG00012086
AMCG00012088 mRNA downstream 349152 10629684 ~ 10634699 (+) False AMCG00012088
TU168604 other upstream 5876 10223004 ~ 10259224 (+) True G134337
TU168639 other upstream 124643 10139954 ~ 10140457 (+) True G134366
TU168638 other upstream 130508 10134027 ~ 10134592 (+) True G134365
TU168629 other upstream 230407 10034186 ~ 10034693 (+) True G134357
TU168607 other upstream 328689 9935926 ~ 9936411 (+) True G134340
TU168610 other downstream 22741 10303273 ~ 10317818 (+) True G134343
TU168966 other downstream 646074 10926606 ~ 10930453 (+) True G134613
TU169090 other downstream 961697 11242229 ~ 11290522 (+) False G134697
TU169086 other downstream 966150 11246682 ~ 11290522 (+) True G134697
TU169087 other downstream 1004218 11284750 ~ 11293899 (+) False G134697

Expression Profile