RNA id: AMCG00012084



Basic Information


Item Value
RNA id AMCG00012084
length 555
RNA type mRNA
GC content 0.47
exon number 7
gene id AMCG00012084
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10363956 ~ 10392598 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGAGAAAACACATTCTACACGCTCAGCCAGATCAGTGTGAGCCTGGATGATTGGCAGAAGGgatttaaatatgcatgcaaGGTTCGGCAGATCGGCgggaaaactaaaatacaaaatatcagcaTGTGCGGAATTCCCACCTCCAAAACCCTCCTCCCCTGTATAATCAACATTAGCATGAGACTGGAGAACATTCAGCTCAGCTGCTCCAAACTGCTGGAGCAATCCTCTGATGGAGCAGCCTGTAACTGCACCAGCAAGAACGGAATAGAAAGCCAAACTCTGGTAAAGCTATGCCAAAGTAAAATTTCAGAAGCTTGCTCTGCCCTTACCAAGATATCCACTGATGTGACACTGGACCCTGATTCAGCCCACTCCAACTTAAAGGTCTCCAGTGATGGGAAGCATGTGATGCCTGATGCACTTCAGAAGACACTGGACAACATGCAACCCAACTGCTCCAAACAGCAAGAACATCCTTCTAATGATTTAGTCAAAATAGTGAGCCAAGCATCGGCCCGAGTGATGCAGAAGTGTCAGTGTCAGGGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168654 lncRNA upstream 93902 10269680 ~ 10270054 (+) True G134378
TU168643 lncRNA upstream 119227 10194394 ~ 10244729 (+) True G134369
TU168606 lncRNA upstream 162986 10199151 ~ 10200970 (+) True G134339
TU168619 lncRNA upstream 183249 9958351 ~ 10180707 (+) False G134350
TU168621 lncRNA upstream 186728 9958351 ~ 10177228 (+) True G134350
TU168804 lncRNA downstream 202251 10594849 ~ 10595406 (+) True G134495
TU168807 lncRNA downstream 205941 10598539 ~ 10598841 (+) True G134498
TU168833 lncRNA downstream 240910 10633508 ~ 10684097 (+) True AMCG00012088
TU168877 lncRNA downstream 457260 10849858 ~ 10853291 (+) True G134556
TU168958 lncRNA downstream 541117 10933715 ~ 10935107 (+) False G134613
AMCG00012083 mRNA upstream 10213 10338828 ~ 10353743 (+) True AMCG00012083
AMCG00012082 mRNA upstream 83424 10265100 ~ 10280532 (+) True AMCG00012082
AMCG00012078 mRNA upstream 263500 10098148 ~ 10100456 (+) True AMCG00012078
AMCG00012079 mRNA upstream 289214 10067556 ~ 10074742 (+) True AMCG00012079
AMCG00012074 mRNA upstream 347765 10014844 ~ 10016191 (+) True AMCG00012074
AMCG00012087 mRNA downstream 150815 10543413 ~ 10545945 (+) True AMCG00012087
AMCG00012086 mRNA downstream 159072 10551670 ~ 10564853 (+) True AMCG00012086
AMCG00012088 mRNA downstream 237086 10629684 ~ 10634699 (+) False AMCG00012088
AMCG00012089 mRNA downstream 267304 10659902 ~ 10668786 (+) True AMCG00012089
AMCG00012096 mRNA downstream 375446 10768044 ~ 10777082 (+) True AMCG00012096
TU168610 other upstream 46138 10303273 ~ 10317818 (+) True G134343
TU168648 other upstream 56117 10252810 ~ 10307839 (+) True G134373
TU168604 other upstream 104732 10223004 ~ 10259224 (+) True G134337
TU168639 other upstream 223499 10139954 ~ 10140457 (+) True G134366
TU168638 other upstream 229364 10134027 ~ 10134592 (+) True G134365
TU168966 other downstream 534008 10926606 ~ 10930453 (+) True G134613
TU169090 other downstream 849631 11242229 ~ 11290522 (+) False G134697
TU169086 other downstream 854084 11246682 ~ 11290522 (+) True G134697
TU169087 other downstream 892152 11284750 ~ 11293899 (+) False G134697
TU169151 other downstream 1043781 11436379 ~ 11446163 (+) True G134743

Expression Profile