RNA id: AMCG00012104


Basic Information

Item Value
RNA id AMCG00012104
length 630
RNA type mRNA
GC content 0.54
exon number 5
gene id AMCG00012104
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10875087 ~ 10879326 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atggagagcaGTAGCGAGGAGGAGAGGGCAATGGAGGACTGGAACGGGCTGATTTCAGGGGAGTGCACAGAGGGTCAGGGGGAAGATGTCGTGGTGGTAACAGAGTTGTCCCCAGAGGTACCTATCACCCCAAATGTCGTCCTGGGATTTACAGCCAGTACTGCAggcTACCTGTGCACTCCAGAAGACAACATCTACAACATCATCTTCTCCCTGTTCAAGATCAGAGACATGGCGAGTggagctgtgctgctggagaTACGCAAACACTGCCCGACAGagATCCAGGATGTAAGAGAGCTTGACCCTGGCAGGTTTATTCGCTACTACTTCACCCCAGACTTCCTCAGACTCAGAGAGATTGGGGCCACtgtggaGTTCACGGTGGGCAGCAGGGCAGTGAACAGGTTCCttgAAGAGATGATTGCCCACCCTTTTGAGACCAGATCTGACAGTTTCTACTTCATCAACAACAGGCTGGTGATGCACCACAAAGCAGAGTACAGCTTCTCGGGTGGTGGGGGCGGGCAGGGCAGTttggagagagggaaagaagaaaggagggagagagagaaggacaaaGGGAGAGAGGAGCGGGGGGGAGGGATATCGAGTTTGTATACGTTGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU168688 lncRNA downstream 527362 10345062 ~ 10347725 (-) True G134402
TU168754 lncRNA downstream 569060 10303569 ~ 10306027 (-) True G134451
TU168743 lncRNA downstream 587958 10225627 ~ 10287129 (-) True G134443
TU168695 lncRNA downstream 673862 10200802 ~ 10201225 (-) True G134404
TU168696 lncRNA downstream 928598 9936100 ~ 9946489 (-) True G134405
TU169026 lncRNA upstream 87950 10967276 ~ 10971088 (-) False G134648
TU169027 lncRNA upstream 87950 10967276 ~ 10982791 (-) True G134648
TU169223 lncRNA upstream 451140 11330466 ~ 11347810 (-) False G134803
TU169245 lncRNA upstream 516634 11395960 ~ 11400701 (-) True G134819
TU169240 lncRNA upstream 617349 11496675 ~ 11769509 (-) True G134817
AMCG00012102 mRNA downstream 16671 10852609 ~ 10858416 (-) True AMCG00012102
AMCG00012101 mRNA downstream 26612 10837316 ~ 10848475 (-) True AMCG00012101
AMCG00012103 mRNA downstream 38482 10830517 ~ 10836605 (-) True AMCG00012103
AMCG00012100 mRNA downstream 47940 10818095 ~ 10827147 (-) True AMCG00012100
AMCG00012095 mRNA downstream 112635 10755045 ~ 10762452 (-) True AMCG00012095
AMCG00012109 mRNA upstream 15022 10894348 ~ 10899593 (-) True AMCG00012109
AMCG00012111 mRNA upstream 77863 10957189 ~ 10961792 (-) True AMCG00012111
AMCG00012114 mRNA upstream 107916 10987242 ~ 10988426 (-) True AMCG00012114
AMCG00012113 mRNA upstream 111291 10990617 ~ 10994160 (-) True AMCG00012113
AMCG00012116 mRNA upstream 124384 11003710 ~ 11016852 (-) True AMCG00012116
TU168910 other downstream 63206 10729775 ~ 10811881 (-) True G134581
TU168748 other downstream 619049 10255526 ~ 10256038 (-) True G134447
TU168746 other downstream 623972 10250271 ~ 10251115 (-) True G134445
TU168677 other downstream 630163 10244421 ~ 10244924 (-) True G134397
TU168739 other downstream 644644 10212142 ~ 10230443 (-) True G134441
TU169020 other upstream 55606 10934932 ~ 10961871 (-) False AMCG00012111
TU169224 other upstream 451140 11330466 ~ 11386979 (-) True G134803
TU169384 other upstream 1194678 12074004 ~ 12101973 (-) True AMCG00012171
TU169390 other upstream 1239954 12119280 ~ 12119632 (-) False AMCG00012170
TU169437 other upstream 1312229 12191555 ~ 12213799 (-) True AMCG00012174

Expression Profile