RNA id: AMCG00012124


Basic Information

Item Value
RNA id AMCG00012124
length 1128
RNA type mRNA
GC content 0.61
exon number 8
gene id AMCG00012124
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11274224 ~ 11282808 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGATCCAGAAGCGGAGCCGCGCCGGGCAGCCAGAGGCGCGGAGAGTGTGGACCAGAGCCGTGGCAGAGGAAACACTGAGGTGTTGAGGGGACAGAGAAAGGGGGTGTTTGTCAGTGGTGTGTCCCAGGTCATCACCCCACCATCCTACTCCTCCCCTGAGCTGGGCAGCGATGTGGCTCTTCTGGCCCTGTCCCCCCCCATGCCCTCCAACCTGCCCACCGTCACCCCTGCTTGTCTGCCTCCCCCTGGGTACTCACCTCCGAGCGGCGCCAAGTtgcccCTGCCTGCTCCTGGCACCCtccagcaggtggcagtgtGGCCCATGAGTGCCAGGCAGTGCCAGTGTCTGTATGATCTGCCCAGCACCGGTTACCCCCTACAATACAGCATTGAGCCGGGCATGATGTGTGCTGGGTATCAAGATGGGGAGAGAGATGCCTGCCAGggTGACTCAGGGGGTCCTCTGCTGTGCAGTGAAGGGGATGTGTGGCTTGTCGTCGGGGTAACTAGTTTCGGTGATGGCTGCGGACGTCCCAATCGGCCGGGCGTGTTCTCGGATGTGCCGCACTTCTCCGCCTGGGTCACTGAGAACACAGGGAGCAGCGTGGGCCCCACACTGCCCCTCCCCACGCACAACCACTCCAACACTCAGAGTGAGACCTGCCCAAATGCCACTGTACTGCACACAGATTGTGGTCGCTTGCCAGGGGCAACAGGAGGCCCCAGGCTTGAGTCTGGTTCTGGAGATGCCTATTGGCCCTGGCAGGTCAGCGTGAGGCAGTTTGGCCTCCACATCTGTGGGGGTGCTGTGGTGTCAGAGAGATGGGTGCTCACAGCTGCTCACTGCTTTAGCAACAGACCCATAAACTTGTCGGATTGGCGTGTTGTGCCAGGGAGGTGGGATCAGTCTGCAGCCAGCCAATGGGAAAACGAGATAGGCTTGAAGATGATGGTGCTTCACCCTGATTACATGCCTGATTGGAGGAGCAGTGATCTGGCCCTGCTGGAGCTCCGTCATAGGCTGGACTGGAGCCAATCAGTGCggcccgtctgtctgtctgtcaacaGCTCCGTCTCACTGTCCAGGGCTGAGTGTTGGGCAACTGGGGGTGAGGAcctCTGCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169027 lncRNA downstream 291433 10967276 ~ 10982791 (-) True G134648
TU169026 lncRNA downstream 303136 10967276 ~ 10971088 (-) False G134648
TU168688 lncRNA downstream 926499 10345062 ~ 10347725 (-) True G134402
TU168754 lncRNA downstream 968197 10303569 ~ 10306027 (-) True G134451
TU168743 lncRNA downstream 987095 10225627 ~ 10287129 (-) True G134443
TU169223 lncRNA upstream 47658 11330466 ~ 11347810 (-) False G134803
TU169245 lncRNA upstream 113152 11395960 ~ 11400701 (-) True G134819
TU169240 lncRNA upstream 213867 11496675 ~ 11769509 (-) True G134817
TU169274 lncRNA upstream 277289 11560097 ~ 11795338 (-) True G134840
TU169280 lncRNA upstream 320715 11603523 ~ 11604157 (-) True G134844
AMCG00012126 mRNA downstream 8655 11263489 ~ 11265569 (-) True AMCG00012126
AMCG00012125 mRNA downstream 49977 11216143 ~ 11224247 (-) True AMCG00012125
AMCG00012120 mRNA downstream 102524 11165809 ~ 11171700 (-) True AMCG00012120
AMCG00012118 mRNA downstream 124010 11141638 ~ 11150214 (-) True AMCG00012118
AMCG00012119 mRNA downstream 151463 11115609 ~ 11122761 (-) True AMCG00012119
AMCG00012131 mRNA upstream 1929 11284737 ~ 11297103 (-) True AMCG00012131
AMCG00012133 mRNA upstream 15219 11298027 ~ 11300821 (-) True AMCG00012133
AMCG00012130 mRNA upstream 30116 11312924 ~ 11319748 (-) True AMCG00012130
AMCG00012129 mRNA upstream 39399 11322207 ~ 11331281 (-) True AMCG00012129
AMCG00012132 mRNA upstream 64680 11347488 ~ 11350937 (-) True AMCG00012132
TU169020 other downstream 312353 10934932 ~ 10961871 (-) False AMCG00012111
TU168910 other downstream 462343 10729775 ~ 10811881 (-) True G134581
TU168748 other downstream 1018186 10255526 ~ 10256038 (-) True G134447
TU168746 other downstream 1023109 10250271 ~ 10251115 (-) True G134445
TU168677 other downstream 1029300 10244421 ~ 10244924 (-) True G134397
TU169224 other upstream 47658 11330466 ~ 11386979 (-) True G134803
TU169384 other upstream 791196 12074004 ~ 12101973 (-) True AMCG00012171
TU169390 other upstream 836472 12119280 ~ 12119632 (-) False AMCG00012170
TU169437 other upstream 908747 12191555 ~ 12213799 (-) True AMCG00012174
TU169436 other upstream 919954 12202762 ~ 12213799 (-) False AMCG00012174

Expression Profile