RNA id: AMCG00012140



Basic Information


Item Value
RNA id AMCG00012140
length 237
RNA type mRNA
GC content 0.48
exon number 2
gene id AMCG00012140
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11380073 ~ 11380772 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAACTGAAGGAGCCTTATAATCTGCAAGAAGTCCAGCTGCCCATCATAAAAAACAAGCGCTGCGAACAGATGTACAAGAAGCCACCGAAGACAGATCTGCCCAAGATCAAAATCACTTCAAAGATGATGTGTGCTGGAGACAAAGCTGGAGGGAAGGATACCTGCCAACCAATAGACTGTAAGCTTACTGAGCGCTTCGGGCTGGTTGCCATAGAAACGGCAGGACGCCTCAGATAA

Function


GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU169092 lncRNA upstream 78008 11300334 ~ 11302065 (+) True G134698
TU169080 lncRNA upstream 146190 11233681 ~ 11233883 (+) True G134692
TU168992 lncRNA upstream 324389 11049065 ~ 11055684 (+) False AMCG00012112
TU168979 lncRNA upstream 397279 10967276 ~ 10982794 (+) True G134615
TU168978 lncRNA upstream 408985 10967276 ~ 10971088 (+) False G134615
TU169157 lncRNA downstream 123188 11503960 ~ 11504648 (+) True G134749
TU169172 lncRNA downstream 238405 11619177 ~ 11870630 (+) True AMCG00012152
TU169183 lncRNA downstream 330478 11711250 ~ 11766411 (+) True G134766
TU169199 lncRNA downstream 438485 11819257 ~ 11844832 (+) True G134779
TU169323 lncRNA downstream 535572 11916344 ~ 11917737 (+) False G134877
AMCG00012127 mRNA upstream 68029 11302454 ~ 11312044 (+) True AMCG00012127
AMCG00012122 mRNA upstream 131421 11247182 ~ 11248652 (+) True AMCG00012122
AMCG00012121 mRNA upstream 155789 11213608 ~ 11224284 (+) True AMCG00012121
AMCG00012123 mRNA upstream 184725 11186768 ~ 11195348 (+) True AMCG00012123
AMCG00012112 mRNA upstream 319043 11055439 ~ 11061030 (+) True AMCG00012112
AMCG00012136 mRNA downstream 5801 11386573 ~ 11388762 (+) True AMCG00012136
AMCG00012138 mRNA downstream 22888 11403660 ~ 11405016 (+) True AMCG00012138
AMCG00012134 mRNA downstream 28672 11409444 ~ 11418782 (+) True AMCG00012134
AMCG00012137 mRNA downstream 55745 11436517 ~ 11440510 (+) True AMCG00012137
AMCG00012135 mRNA downstream 59740 11440512 ~ 11445488 (+) True AMCG00012135
TU169087 other upstream 86174 11284750 ~ 11293899 (+) False G134697
TU169090 other upstream 89551 11242229 ~ 11290522 (+) False G134697
TU169086 other upstream 89551 11246682 ~ 11290522 (+) True G134697
TU168966 other upstream 449620 10926606 ~ 10930453 (+) True G134613
TU168610 other upstream 1062255 10303273 ~ 10317818 (+) True G134343
TU169151 other downstream 55607 11436379 ~ 11446163 (+) True G134743
TU169350 other downstream 650125 12030897 ~ 12031490 (+) True G134898
TU169413 other downstream 791766 12172538 ~ 12172802 (+) True G134955
TU169416 other downstream 800289 12181061 ~ 12181320 (+) True G134958
TU169428 other downstream 810783 12191555 ~ 12192408 (+) True G134968

Expression Profile