RNA id: AMCG00012149


Basic Information

Item Value
RNA id AMCG00012149
length 363
RNA type mRNA
GC content 0.55
exon number 3
gene id AMCG00012149
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11656076 ~ 11657132 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTAAACCAATACCAGGAAGGCCGTGACATCGCCCTGGTAGAGCTCAGCGGGTCAGTGTCCTACAGTCAGTACATCAGTCCTGTAACTCTGGCTGAGGCTAATGCTTACGACTTCACCTGGGGCTGGGAGTGCTGGGCGACCGGCTGGGGGACAATTGGAAAGGATGtgcctCTACCAGACCCTAAAATCCTGCAGGAGgGTGACTCTGGGGGTCCTCTCTTCTTTAAGAATAAAAAGTTGTCCTGGGTCCAGTCTGGGATCACCAGTTTTGGGAAAGACTGTCCCGCACCCAACGCTCCAGGGGTCTTCACCCGGGTCTCTAGCTTCCGCCCCTGGATAAAGCAGCACAGTGGTGTCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169280 lncRNA downstream 51919 11603523 ~ 11604157 (-) True G134844
TU169245 lncRNA downstream 255375 11395960 ~ 11400701 (-) True G134819
TU169223 lncRNA downstream 308266 11330466 ~ 11347810 (-) False G134803
TU169027 lncRNA downstream 673285 10967276 ~ 10982791 (-) True G134648
TU169026 lncRNA downstream 684988 10967276 ~ 10971088 (-) False G134648
TU169288 lncRNA upstream 2589 11659721 ~ 11660305 (-) True G134849
TU169296 lncRNA upstream 87762 11744894 ~ 11767954 (-) True G134855
TU169293 lncRNA upstream 108940 11766072 ~ 11766416 (-) True G134853
TU169351 lncRNA upstream 357220 12014352 ~ 12017558 (-) True G134899
TU169392 lncRNA upstream 461208 12118340 ~ 12118592 (-) True G134936
AMCG00012141 mRNA downstream 115986 11536026 ~ 11540090 (-) True AMCG00012141
AMCG00012139 mRNA downstream 267342 11382279 ~ 11388734 (-) True AMCG00012139
AMCG00012132 mRNA downstream 305139 11347488 ~ 11350937 (-) True AMCG00012132
AMCG00012129 mRNA downstream 324795 11322207 ~ 11331281 (-) True AMCG00012129
AMCG00012130 mRNA downstream 336328 11312924 ~ 11319748 (-) True AMCG00012130
AMCG00012154 mRNA upstream 119309 11776441 ~ 11789617 (-) True AMCG00012154
AMCG00012157 mRNA upstream 150867 11807999 ~ 11813611 (-) True AMCG00012157
AMCG00012156 mRNA upstream 185936 11843068 ~ 11866778 (-) True AMCG00012156
AMCG00012158 mRNA upstream 214105 11871237 ~ 11885827 (-) True AMCG00012158
AMCG00012160 mRNA upstream 233219 11890351 ~ 11896617 (-) True AMCG00012160
TU169224 other downstream 269097 11330466 ~ 11386979 (-) True G134803
TU169020 other downstream 694205 10934932 ~ 10961871 (-) False AMCG00012111
TU168910 other downstream 844195 10729775 ~ 10811881 (-) True G134581
TU168748 other downstream 1400038 10255526 ~ 10256038 (-) True G134447
TU168746 other downstream 1404961 10250271 ~ 10251115 (-) True G134445
TU169384 other upstream 416872 12074004 ~ 12101973 (-) True AMCG00012171
TU169390 other upstream 462148 12119280 ~ 12119632 (-) False AMCG00012170
TU169437 other upstream 534423 12191555 ~ 12213799 (-) True AMCG00012174
TU169436 other upstream 545630 12202762 ~ 12213799 (-) False AMCG00012174
TU169444 other upstream 564073 12221205 ~ 12223185 (-) True G134981

Expression Profile