Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00012167 |
| length | 672 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 7 |
| gene id | AMCG00012167 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 12085358 ~ 12095939 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005484 | SNAP receptor activity | molecular_function |
| id | description |
|---|---|
| K08486 | STX1B_2_3; syntaxin 1B/2/3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU169327 | lncRNA | upstream | 159227 | 11924268 ~ 11926131 (+) | True | G134879 |
| TU169324 | lncRNA | upstream | 167093 | 11916354 ~ 11918265 (+) | True | G134877 |
| TU169323 | lncRNA | upstream | 167621 | 11916344 ~ 11917737 (+) | False | G134877 |
| TU169322 | lncRNA | upstream | 167621 | 11916354 ~ 11917737 (+) | False | G134877 |
| TU169199 | lncRNA | upstream | 240526 | 11819257 ~ 11844832 (+) | True | G134779 |
| TU169378 | lncRNA | downstream | 23292 | 12119231 ~ 12119660 (+) | True | G134923 |
| TU169399 | lncRNA | downstream | 52128 | 12148067 ~ 12158458 (+) | True | G134942 |
| TU169402 | lncRNA | downstream | 63279 | 12159218 ~ 12159429 (+) | True | G134944 |
| TU169403 | lncRNA | downstream | 64656 | 12160595 ~ 12161253 (+) | True | G134945 |
| TU169404 | lncRNA | downstream | 65519 | 12161458 ~ 12162298 (+) | True | G134946 |
| AMCG00012161 | mRNA | upstream | 48836 | 12033347 ~ 12036522 (+) | True | AMCG00012161 |
| AMCG00012162 | mRNA | upstream | 56449 | 11991515 ~ 12028909 (+) | True | AMCG00012162 |
| AMCG00012159 | mRNA | upstream | 171404 | 11901547 ~ 11913954 (+) | True | AMCG00012159 |
| AMCG00012155 | mRNA | upstream | 282233 | 11798577 ~ 11803125 (+) | True | AMCG00012155 |
| AMCG00012152 | mRNA | upstream | 309107 | 11767779 ~ 11776251 (+) | False | AMCG00012152 |
| AMCG00012168 | mRNA | downstream | 36308 | 12132247 ~ 12141475 (+) | True | AMCG00012168 |
| AMCG00012172 | mRNA | downstream | 121767 | 12217706 ~ 12223005 (+) | True | AMCG00012172 |
| AMCG00012177 | mRNA | downstream | 130375 | 12226314 ~ 12238811 (+) | True | AMCG00012177 |
| AMCG00012178 | mRNA | downstream | 149876 | 12245815 ~ 12247965 (+) | True | AMCG00012178 |
| AMCG00012181 | mRNA | downstream | 302665 | 12398604 ~ 12403204 (+) | True | AMCG00012181 |
| TU169350 | other | upstream | 53868 | 12030897 ~ 12031490 (+) | True | G134898 |
| TU169151 | other | upstream | 639195 | 11436379 ~ 11446163 (+) | True | G134743 |
| TU169087 | other | upstream | 791459 | 11284750 ~ 11293899 (+) | False | G134697 |
| TU169090 | other | upstream | 794836 | 11242229 ~ 11290522 (+) | False | G134697 |
| TU169413 | other | downstream | 76599 | 12172538 ~ 12172802 (+) | True | G134955 |
| TU169416 | other | downstream | 85122 | 12181061 ~ 12181320 (+) | True | G134958 |
| TU169428 | other | downstream | 95616 | 12191555 ~ 12192408 (+) | True | G134968 |
| TU169500 | other | downstream | 470273 | 12566212 ~ 12716115 (+) | False | G135026 |
| TU169507 | other | downstream | 492085 | 12588024 ~ 12716115 (+) | True | G135026 |
