RNA id: AMCG00012176



Basic Information


Item Value
RNA id AMCG00012176
length 306
RNA type mRNA
GC content 0.68
exon number 2
gene id AMCG00012176
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12181113 ~ 12185826 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGGATGGGCTCCGGCTCCTCTTTGCGCTCCTCCTTCACCTTGATCGGAGGGGCGGCGGCGGCTGGGGGGGCGGGTGTAGGCGGCTGCGGGTGGGTGGCCGACTCGGAGGTCTTCTTCGGGTGGGAGTGCAGGAGCAGCCGCCGCCGAATCGCCGTCCGGACCCGCAGCCAGTCAGCCCGCACTTTCACCGGCTCCCACGGTCCCGCCAGCAGCCTGCTGGGTACCGAGAGACAGTTTGGAGCGGCCCCGTTACGGATTGAGGACGATTTCAGGCGGATGGCGACTCCTTCCCCGAGTTTTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU169392 lncRNA downstream 62521 12118340 ~ 12118592 (-) True G134936
TU169351 lncRNA downstream 163555 12014352 ~ 12017558 (-) True G134899
TU169296 lncRNA downstream 413159 11744894 ~ 11767954 (-) True G134855
TU169293 lncRNA downstream 414697 11766072 ~ 11766416 (-) True G134853
TU169288 lncRNA downstream 520808 11659721 ~ 11660305 (-) True G134849
TU169465 lncRNA upstream 80777 12266603 ~ 12266826 (-) True G135002
TU169471 lncRNA upstream 176709 12362535 ~ 12362840 (-) True G135008
TU169716 lncRNA upstream 380847 12566673 ~ 12589807 (-) True G135148
TU169707 lncRNA upstream 382425 12568251 ~ 12716110 (-) False G135146
TU169728 lncRNA upstream 393039 12578865 ~ 12632059 (-) False G135151
AMCG00012175 mRNA downstream 1377 12153169 ~ 12179736 (-) True AMCG00012175
AMCG00012169 mRNA downstream 34202 12142510 ~ 12146911 (-) True AMCG00012169
AMCG00012170 mRNA downstream 58388 12109540 ~ 12122725 (-) True AMCG00012170
AMCG00012171 mRNA downstream 73699 12101244 ~ 12107414 (-) False AMCG00012171
AMCG00012166 mRNA downstream 129902 12042632 ~ 12051211 (-) True AMCG00012166
AMCG00012174 mRNA upstream 4189 12190015 ~ 12211955 (-) False AMCG00012174
AMCG00012173 mRNA upstream 37468 12223294 ~ 12226142 (-) True AMCG00012173
AMCG00012180 mRNA upstream 82399 12268225 ~ 12279242 (-) True AMCG00012180
AMCG00012179 mRNA upstream 133075 12318901 ~ 12340418 (-) True AMCG00012179
AMCG00012183 mRNA upstream 218166 12403992 ~ 12423343 (-) True AMCG00012183
TU169390 other downstream 61481 12119280 ~ 12119632 (-) False AMCG00012170
TU169384 other downstream 79140 12074004 ~ 12101973 (-) True AMCG00012171
TU169224 other downstream 794134 11330466 ~ 11386979 (-) True G134803
TU169020 other downstream 1219242 10934932 ~ 10961871 (-) False AMCG00012111
TU168910 other downstream 1369232 10729775 ~ 10811881 (-) True G134581
TU169437 other upstream 5729 12191555 ~ 12213799 (-) True AMCG00012174
TU169436 other upstream 16936 12202762 ~ 12213799 (-) False AMCG00012174
TU169444 other upstream 35379 12221205 ~ 12223185 (-) True G134981
TU169690 other upstream 447928 12633754 ~ 12960922 (-) False G135146
TU169730 other upstream 516624 12702450 ~ 12703485 (-) True G135152

Expression Profile