RNA id: AMCG00012191



Basic Information


Item Value
RNA id AMCG00012191
length 597
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00012191
representative False

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12702323 ~ 12724194 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAAGACACTGTTCTGCCCTGTTACCTCTCACCCAACATCAGCGCTGAGGACATGCAGATCATGTGGTTCAGAGAGGACCCCTCAGCCCCTGTCTGTTTATACCGGTATGGCCGGTATAACTTTAACAGGCAGATCCCATCCTACAAGGGCAGGGCTGAGCTTTTCCCAGAGGAGTTCAGGAAAGGCAACGTGTCTCTGAGACTGAAGGATGTGCGCGGCTCTGATGATGGACAGTACAACTGTATGGTCCAGTATGCAGGCTCGTATGAAGAGGCTCTTATTGATGTGGTTGTCAGAGGTCAGTCCTCAGTGTCCCTCCACTCTGAAGGAGGTCAGACCCGGCTGGAGTGCAGGTCAGATCGGTACCCTGAGCCTGCAGTGATCTGGACAGACAGGGACGGACACGACGTCACATCACTGTCCAACACcacagagcagagagacagtgaggggCGTCTCAGTCTGAGGAGCTTCATCCCAGTCAGACAGGAGTCCAATGTCTTCAGCTGCCTGATTAGAAGTGCAGGATCTGAACCAAACTGGGAACCACAACTCCACATACCCAATGAAACAGATCAGAGACTGAAGCCAGTCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU169515 lncRNA upstream 15120 12636699 ~ 12699876 (+) True G135027
TU169517 lncRNA upstream 21181 12692668 ~ 12693815 (+) True G135028
TU169488 lncRNA upstream 66184 12613973 ~ 12648812 (+) False G135025
TU169519 lncRNA upstream 66383 12612165 ~ 12648613 (+) True G135030
TU169489 lncRNA upstream 68916 12613973 ~ 12646080 (+) False G135025
TU169528 lncRNA downstream 62464 12784088 ~ 12786060 (+) True G135038
TU169539 lncRNA downstream 114628 12836252 ~ 12840315 (+) True G135045
TU169548 lncRNA downstream 151594 12873218 ~ 12895581 (+) True G135051
TU169550 lncRNA downstream 168146 12889770 ~ 12901593 (+) True G135053
TU169552 lncRNA downstream 175406 12897030 ~ 12897756 (+) True G135055
AMCG00012192 mRNA upstream 60680 12651153 ~ 12654316 (+) True AMCG00012192
AMCG00012198 mRNA upstream 91915 12621011 ~ 12623081 (+) True AMCG00012198
AMCG00012186 mRNA upstream 123624 12588930 ~ 12591372 (+) True AMCG00012186
AMCG00012190 mRNA upstream 145996 12566641 ~ 12569000 (+) True AMCG00012190
AMCG00012189 mRNA upstream 166352 12541835 ~ 12548644 (+) True AMCG00012189
AMCG00012193 mRNA downstream 36397 12758021 ~ 12758746 (+) True AMCG00012193
AMCG00012194 mRNA downstream 41000 12762624 ~ 12763676 (+) True AMCG00012194
AMCG00012199 mRNA downstream 65776 12787400 ~ 12788020 (+) True AMCG00012199
AMCG00012200 mRNA downstream 68903 12790527 ~ 12799451 (+) True AMCG00012200
AMCG00012206 mRNA downstream 311484 13033108 ~ 13065375 (+) True AMCG00012206
TU169491 other upstream 68424 12613973 ~ 12646572 (+) True G135025
TU169428 other upstream 522588 12191555 ~ 12192408 (+) True G134968
TU169416 other upstream 533676 12181061 ~ 12181320 (+) True G134958
TU169413 other upstream 542194 12172538 ~ 12172802 (+) True G134955
TU169350 other upstream 683506 12030897 ~ 12031490 (+) True G134898
TU169527 other downstream 49159 12770783 ~ 12777157 (+) True G135037
TU169530 other downstream 63584 12785208 ~ 12786060 (+) False G135038
TU169576 other downstream 246753 12968377 ~ 12974053 (+) True G135070
TU169632 other downstream 547572 13269196 ~ 13276971 (+) True AMCG00012217
TU169557 other downstream 700811 13422435 ~ 13425359 (+) True G135058

Expression Profile