RNA id: AMCG00012205


Basic Information

Item Value
RNA id AMCG00012205
length 306
RNA type mRNA
GC content 0.49
exon number 5
gene id AMCG00012205
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12903257 ~ 12923677 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGACGTTAAAGGCTTACGCTTGCTGGATGTGTTGTGTATGACATTGTCAGGCATTGTCGTGAATCAGATGTGTGAAGACATTATAATATCCCTAGATGGTCTTCTCATGGTGACAGAGGGGAGGGAGTTCAGCTGTGAGCTCTGTTCCTCCTCCCAGCGCAGGGCTGATAATAATGGCGTCTCTCTGTACGGCTCAGACAGGAGTGTTGATGCAGACGGGCAGTTGGGCTTCAAGAACCAAGTCAAGCCCTTACAaaggctTTTGGGGATCCCAGAGAATGAATGCATCCCTGAGAAGATCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169743 lncRNA downstream 62944 12792948 ~ 12840313 (-) True G135160
TU169738 lncRNA downstream 101189 12764572 ~ 12802068 (-) True AMCG00012197
TU169709 lncRNA downstream 202142 12687026 ~ 12701115 (-) False G135146
TU169719 lncRNA downstream 202701 12637093 ~ 12700556 (-) False AMCG00012196
TU169722 lncRNA downstream 287931 12614254 ~ 12615326 (-) False G135151
TU169763 lncRNA upstream 164168 13087845 ~ 13101480 (-) True G135172
TU169778 lncRNA upstream 226838 13150515 ~ 13214542 (-) True G135184
TU169792 lncRNA upstream 347135 13270812 ~ 13279294 (-) True G135193
TU169812 lncRNA upstream 398054 13321731 ~ 13329044 (-) True G135202
TU169837 lncRNA upstream 493728 13417405 ~ 13418804 (-) True G135217
AMCG00012202 mRNA downstream 16458 12859761 ~ 12886799 (-) True AMCG00012202
AMCG00012201 mRNA downstream 77504 12806962 ~ 12825753 (-) True AMCG00012201
AMCG00012197 mRNA downstream 126335 12767850 ~ 12776922 (-) False AMCG00012197
AMCG00012195 mRNA downstream 146910 12721237 ~ 12756347 (-) True AMCG00012195
AMCG00012196 mRNA downstream 202527 12699610 ~ 12700730 (-) True AMCG00012196
AMCG00012204 mRNA upstream 6110 12929787 ~ 12938820 (-) True AMCG00012204
AMCG00012203 mRNA upstream 31328 12955005 ~ 12960892 (-) True AMCG00012203
AMCG00012208 mRNA upstream 58652 12982329 ~ 12992699 (-) True AMCG00012208
AMCG00012215 mRNA upstream 158746 13082423 ~ 13084065 (-) True AMCG00012215
AMCG00012216 mRNA upstream 164296 13087973 ~ 13101374 (-) True AMCG00012216
TU169730 other downstream 199772 12702450 ~ 12703485 (-) True G135152
TU169444 other downstream 680072 12221205 ~ 12223185 (-) True G134981
TU169437 other downstream 689458 12191555 ~ 12213799 (-) True AMCG00012174
TU169436 other downstream 689458 12202762 ~ 12213799 (-) False AMCG00012174
TU169390 other downstream 783625 12119280 ~ 12119632 (-) False AMCG00012170
TU169761 other upstream 158544 13082221 ~ 13101480 (-) False G135172
TU169764 other upstream 158544 13082221 ~ 13084161 (-) False G135172
TU169765 other upstream 158544 13082221 ~ 13084161 (-) False G135172
TU169786 other upstream 307995 13231672 ~ 13232344 (-) False AMCG00012222
TU169801 other upstream 374767 13298444 ~ 13299436 (-) False AMCG00012226

Expression Profile