RNA id: AMCG00012247


Basic Information

Item Value
RNA id AMCG00012247
length 292
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00012247
representative False

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13850378 ~ 13855055 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gatggGCTCTGCAATCCAGATGCTATCGGTGGCCCTAGGGCTTCTGGGCCTGGTGGCGGCGGTGGTGTGCTGCGCTGTGCCCCTGTGGAAGCAGTCAGCTTTTGTTGGACAGAACATCGTCACCGCACAGGAGCTGGGACCCTGTATCTTCATTGGCTGGGCTGGGGGGGCCTTGCTGCTGCTGGCAGGGGGGCTTCTGTGCTGCTTTAATGGCCtaaggggggggggtggtgggggcgGGGCAGCCAAGTATTATGCCAACAGCTCAGCGCCACCTAGTAAGAATTATGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169926 lncRNA upstream 180149 13672114 ~ 13673799 (+) True G135282
TU169924 lncRNA upstream 188067 13665634 ~ 13665881 (+) True G135280
TU169893 lncRNA upstream 228588 13532698 ~ 13625360 (+) False G135255
TU169892 lncRNA upstream 266418 13532698 ~ 13587530 (+) True G135255
TU170036 lncRNA downstream 47252 13902307 ~ 13904536 (+) True G135358
TU170037 lncRNA downstream 49661 13904716 ~ 13905291 (+) True G135359
TU170033 lncRNA downstream 50420 13905475 ~ 13906347 (+) True G135355
TU170057 lncRNA downstream 72933 13927988 ~ 13956305 (+) True G135366
TU170034 lncRNA downstream 91261 13946316 ~ 13948827 (+) True G135356
AMCG00012248 mRNA upstream 11955 13838455 ~ 13841993 (+) True AMCG00012248
AMCG00012249 mRNA upstream 17128 13831581 ~ 13836820 (+) True AMCG00012249
AMCG00012245 mRNA upstream 36403 13813548 ~ 13817545 (+) True AMCG00012245
AMCG00012243 mRNA upstream 65715 13787380 ~ 13788233 (+) True AMCG00012243
AMCG00012241 mRNA upstream 109957 13741239 ~ 13743991 (+) True AMCG00012241
AMCG00012244 mRNA downstream 4995 13860050 ~ 13877142 (+) True AMCG00012244
AMCG00012246 mRNA downstream 27189 13882244 ~ 13885130 (+) True AMCG00012246
AMCG00012255 mRNA downstream 113476 13968531 ~ 13977224 (+) True AMCG00012255
AMCG00012254 mRNA downstream 124415 13979470 ~ 13982769 (+) True AMCG00012254
AMCG00012252 mRNA downstream 129409 13984464 ~ 13989166 (+) True AMCG00012252
TU169982 other upstream 40192 13807213 ~ 13813756 (+) False AMCG00012245
TU169904 other upstream 268032 13584270 ~ 13585916 (+) True G135264
TU169873 other upstream 333454 13519421 ~ 13520494 (+) True G135240
TU169847 other upstream 345149 13471101 ~ 13508799 (+) False AMCG00012228
TU170041 other downstream 207182 14062237 ~ 14095797 (+) True AMCG00012253
TU170232 other downstream 391708 14246763 ~ 14295415 (+) True AMCG00012268
TU170267 other downstream 520578 14375633 ~ 14377651 (+) True G135541
TU170274 other downstream 522617 14377672 ~ 14378695 (+) False G135544
TU170281 other downstream 533020 14388075 ~ 14389685 (+) False AMCG00012267