RNA id: AMCG00012268



Basic Information


Item Value
RNA id AMCG00012268
length 762
RNA type mRNA
GC content 0.57
exon number 3
gene id AMCG00012268
representative False

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14246763 ~ 14296659 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGggctctctctgtcctctcctccTGCTGCCCTGGGCTTTGCTCTCACTGTGCCAGCCTGGCATCATCCTGGGCTGTCACAATGGGTCCAAAGTAGAGTGCCAGAGCGCCAGCTTCGTGCCCGGGTACAACCTGGTGGGCGAAGGGTTCGATATCGTCAGCATGAAGCGGAAGGGTGCCTACGTGATTAATGTGGACAAATGGGCGATGGCAGATGGGAGATGTCGGCTGTGCAAGAACACCCAGCTGGGCGGTAATTTGCAGAAGGTGCCCGACTCGGTGCTGGACTGGCGCCCTCGGGTCAACTGTCGCCACAGCGTCACCAGCAAGATGTACGAGTCCAGCGAGTCAGTGCTGAAGGACAGCACTGAGACCACCAGTGCCAGCTGGAAACTGGGTCTGGATCTGAAGAGGATGGGCAACAAACAGGTGGGCGGCACCTACACGGACATTACCAAGTTTGCCACGGAAAGGTCCAAGTCTGACAATTTCCGTCTGAAAGACCAACCTCCCCTGAACTCTGAGTTCCTCAAGACACTGCGCTCTCTTCCCAAAGAGTACACCTGCAAAACAGCCACTAATGTGGAGTGTGCGCCCAACCTGGGGGGAGACCACTGCCAAAGCTACCTCCCATCGCCAATGTCTAAAGACCAGGCTGCCCGCTTTGTGGGACGCAACCTGATGCACATCCCTGAGCCCTTCCTGAGTGCCCTGCAGAACCAGGGGCAGCAGCGTCCAGCCAAATATATCTTCGGCCTTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU170228 lncRNA upstream 61048 14226990 ~ 14232263 (+) True G135506
TU170089 lncRNA upstream 116504 14173947 ~ 14176807 (+) False AMCG00012262
TU170057 lncRNA upstream 337006 13927988 ~ 13956305 (+) True G135366
TU170034 lncRNA upstream 344484 13946316 ~ 13948827 (+) True G135356
TU170033 lncRNA upstream 386964 13905475 ~ 13906347 (+) True G135355
TU170265 lncRNA downstream 71390 14368049 ~ 14368337 (+) True G135540
TU170270 lncRNA downstream 76381 14373040 ~ 14373945 (+) True G135542
TU170275 lncRNA downstream 81013 14377672 ~ 14378695 (+) True G135544
TU170321 lncRNA downstream 221557 14518216 ~ 14521605 (+) True G135575
TU170332 lncRNA downstream 238865 14535524 ~ 14538864 (+) True G135582
AMCG00012263 mRNA upstream 93316 14186727 ~ 14199995 (+) True AMCG00012263
AMCG00012262 mRNA upstream 110144 14173913 ~ 14183167 (+) True AMCG00012262
AMCG00012260 mRNA upstream 175342 14100100 ~ 14117969 (+) True AMCG00012260
AMCG00012253 mRNA upstream 224122 14062446 ~ 14069189 (+) False AMCG00012253
AMCG00012251 mRNA upstream 235757 14048952 ~ 14057554 (+) True AMCG00012251
AMCG00012273 mRNA downstream 15628 14312287 ~ 14314436 (+) True AMCG00012273
AMCG00012266 mRNA downstream 41214 14337873 ~ 14372596 (+) True AMCG00012266
AMCG00012267 mRNA downstream 91379 14388038 ~ 14389607 (+) True AMCG00012267
AMCG00012276 mRNA downstream 102454 14399113 ~ 14410440 (+) True AMCG00012276
AMCG00012274 mRNA downstream 119348 14416007 ~ 14423640 (+) True AMCG00012274
TU170041 other upstream 197514 14062237 ~ 14095797 (+) True AMCG00012253
TU170021 other upstream 438392 13850378 ~ 13854919 (+) True AMCG00012247
TU169982 other upstream 479555 13807213 ~ 13813756 (+) False AMCG00012245
TU169904 other upstream 707395 13584270 ~ 13585916 (+) True G135264
TU169873 other upstream 772817 13519421 ~ 13520494 (+) True G135240
TU170267 other downstream 78974 14375633 ~ 14377651 (+) True G135541
TU170274 other downstream 81013 14377672 ~ 14378695 (+) False G135544
TU170281 other downstream 91416 14388075 ~ 14389685 (+) False AMCG00012267
TU170305 other downstream 138306 14434965 ~ 14435728 (+) True G135566
TU170313 other downstream 287465 14584124 ~ 14585770 (+) True G135573

Expression Profile