Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00012285 |
| length | 327 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 3 |
| gene id | AMCG00012285 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 14637970 ~ 14638967 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| K23531 | CABP1_2_4_5; calcium-binding protein 1/2/4/5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170353 | lncRNA | upstream | 27233 | 14570375 ~ 14610737 (+) | True | G135595 |
| TU170366 | lncRNA | upstream | 36387 | 14597130 ~ 14601583 (+) | True | G135606 |
| TU170347 | lncRNA | upstream | 60972 | 14563576 ~ 14576998 (+) | True | G135594 |
| TU170332 | lncRNA | upstream | 99106 | 14535524 ~ 14538864 (+) | True | G135582 |
| TU170321 | lncRNA | upstream | 116365 | 14518216 ~ 14521605 (+) | True | G135575 |
| TU170391 | lncRNA | downstream | 24785 | 14663752 ~ 14707073 (+) | True | G135625 |
| TU170405 | lncRNA | downstream | 36885 | 14675852 ~ 14677500 (+) | True | G135634 |
| TU170303 | lncRNA | downstream | 74813 | 14713780 ~ 14715881 (+) | True | AMCG00012294 |
| TU170436 | lncRNA | downstream | 165513 | 14804480 ~ 14804953 (+) | True | G135656 |
| TU170437 | lncRNA | downstream | 172771 | 14811738 ~ 14818725 (+) | True | G135657 |
| AMCG00012284 | mRNA | upstream | 10005 | 14624519 ~ 14627965 (+) | True | AMCG00012284 |
| AMCG00012279 | mRNA | upstream | 67778 | 14567367 ~ 14570192 (+) | True | AMCG00012279 |
| AMCG00012275 | mRNA | upstream | 185741 | 14445064 ~ 14452229 (+) | True | AMCG00012275 |
| AMCG00012278 | mRNA | upstream | 194876 | 14438708 ~ 14443094 (+) | True | AMCG00012278 |
| AMCG00012277 | mRNA | upstream | 203084 | 14427959 ~ 14434886 (+) | True | AMCG00012277 |
| AMCG00012293 | mRNA | downstream | 14472 | 14653439 ~ 14655115 (+) | True | AMCG00012293 |
| AMCG00012294 | mRNA | downstream | 73209 | 14712176 ~ 14726783 (+) | False | AMCG00012294 |
| AMCG00012298 | mRNA | downstream | 275617 | 14914584 ~ 14915573 (+) | True | AMCG00012298 |
| AMCG00012300 | mRNA | downstream | 325077 | 14964044 ~ 15134139 (+) | False | AMCG00012300 |
| AMCG00012305 | mRNA | downstream | 757385 | 15396352 ~ 15397381 (+) | True | AMCG00012305 |
| TU170313 | other | upstream | 52200 | 14584124 ~ 14585770 (+) | True | G135573 |
| TU170305 | other | upstream | 202242 | 14434965 ~ 14435728 (+) | True | G135566 |
| TU170281 | other | upstream | 248285 | 14388075 ~ 14389685 (+) | False | AMCG00012267 |
| TU170274 | other | upstream | 259275 | 14377672 ~ 14378695 (+) | False | G135544 |
| TU170267 | other | upstream | 260319 | 14375633 ~ 14377651 (+) | True | G135541 |
| TU170413 | other | downstream | 71277 | 14710244 ~ 14712641 (+) | False | AMCG00012294 |
| TU170424 | other | downstream | 349331 | 14988298 ~ 15009803 (+) | True | G135649 |
| TU170455 | other | downstream | 480758 | 15119725 ~ 15623881 (+) | True | G135670 |
| TU170537 | other | downstream | 813102 | 15452069 ~ 15479549 (+) | True | AMCG00012302 |
| TU170550 | other | downstream | 920937 | 15559904 ~ 15563836 (+) | True | G135744 |
