RNA id: AMCG00012293



Basic Information


Item Value
RNA id AMCG00012293
length 492
RNA type mRNA
GC content 0.63
exon number 3
gene id AMCG00012293
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14653439 ~ 14655115 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCTTTAAACACAGAGAACATCCAGCCCCCTCTGGAGGAGAGCGCCACCCCCTCCGCCGGGGAGGACCAGCCACAGCCGGAGGAATCACAGGAAGAGGTGGGGCCGCAGACAGCCCCGCACACCGCCCCCTCACCTTCCCCATCTGCTCCCTCCCCCACCGCGGACGCCACCGCTGGCtcccagccaatcacagagccgCAGCCGCCCGTCGACCCTGACCCCTGTCCCAGTCCCGCCTCCCCGGTCCTTGCCCCCGTCGCCTCCAAGACCTCCTCCCCTCAGCAGGAAGTGGTCAAGCCCATACAGGAAGTGGTCATCGTGAATGagaagaaaattgaaaatgCCAAGCTCCTGAGTGTGGTGGCGCTAGTGGGCGGGGCTCTCATCATCATCGCCTGCGTCATCAACTGGACCACCTCAGACCCACCCACAAGAGGTCTGCTAGGACTGGTGGACCCAGGATCGACTGACACATCGATTGACCCTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU170353 lncRNA upstream 42702 14570375 ~ 14610737 (+) True G135595
TU170366 lncRNA upstream 51856 14597130 ~ 14601583 (+) True G135606
TU170347 lncRNA upstream 76441 14563576 ~ 14576998 (+) True G135594
TU170332 lncRNA upstream 114575 14535524 ~ 14538864 (+) True G135582
TU170321 lncRNA upstream 131834 14518216 ~ 14521605 (+) True G135575
TU170391 lncRNA downstream 8637 14663752 ~ 14707073 (+) True G135625
TU170405 lncRNA downstream 20737 14675852 ~ 14677500 (+) True G135634
TU170303 lncRNA downstream 58665 14713780 ~ 14715881 (+) True AMCG00012294
TU170436 lncRNA downstream 149365 14804480 ~ 14804953 (+) True G135656
TU170437 lncRNA downstream 156623 14811738 ~ 14818725 (+) True G135657
AMCG00012285 mRNA upstream 14472 14637970 ~ 14638967 (+) True AMCG00012285
AMCG00012284 mRNA upstream 25474 14624519 ~ 14627965 (+) True AMCG00012284
AMCG00012279 mRNA upstream 83247 14567367 ~ 14570192 (+) True AMCG00012279
AMCG00012275 mRNA upstream 201210 14445064 ~ 14452229 (+) True AMCG00012275
AMCG00012278 mRNA upstream 210345 14438708 ~ 14443094 (+) True AMCG00012278
AMCG00012294 mRNA downstream 57061 14712176 ~ 14726783 (+) False AMCG00012294
AMCG00012298 mRNA downstream 259469 14914584 ~ 14915573 (+) True AMCG00012298
AMCG00012300 mRNA downstream 308929 14964044 ~ 15134139 (+) False AMCG00012300
AMCG00012305 mRNA downstream 741237 15396352 ~ 15397381 (+) True AMCG00012305
AMCG00012303 mRNA downstream 744318 15399433 ~ 15400438 (+) True AMCG00012303
TU170313 other upstream 67669 14584124 ~ 14585770 (+) True G135573
TU170305 other upstream 217711 14434965 ~ 14435728 (+) True G135566
TU170281 other upstream 263754 14388075 ~ 14389685 (+) False AMCG00012267
TU170274 other upstream 274744 14377672 ~ 14378695 (+) False G135544
TU170267 other upstream 275788 14375633 ~ 14377651 (+) True G135541
TU170413 other downstream 55129 14710244 ~ 14712641 (+) False AMCG00012294
TU170424 other downstream 333183 14988298 ~ 15009803 (+) True G135649
TU170455 other downstream 464610 15119725 ~ 15623881 (+) True G135670
TU170537 other downstream 796954 15452069 ~ 15479549 (+) True AMCG00012302
TU170550 other downstream 904789 15559904 ~ 15563836 (+) True G135744

Expression Profile