RNA id: AMCG00012302


Basic Information

Item Value
RNA id AMCG00012302
length 354
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00012302
representative False

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 15452069 ~ 15479549 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aTGGAGTCGTGTCGTCCAGAGATGTTTGATTTCCGGGGGGTGTCCATGACTCCCTATTTCACTGACAACTATGACAATGTAGAGAAATTCTCAGCCAGACCAGACGACATTCTCATCGCCACCTACCCTAAAGCTGGCACTACCTGGGTGTCCCACTTGCTGGATCAGATCTATTTTGGAGACGACCCCAAGAGCCTGGCATCTCGCCCCGTCTATGAGAGGGAACCATTCCTGGAGATCTggatGGTGGGGGACTGGCAGAATCACTTCACTGTCTCACAGAGTGAGGAGTTTGATGAAGACTACCAGAGGAAGATGAAGGACACCACACTGACCTTCAGGATGGAGCTATAg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170523 lncRNA upstream 113326 15351885 ~ 15357725 (+) True G135721
TU170454 lncRNA upstream 225057 15049635 ~ 15245994 (+) True AMCG00012300
TU170453 lncRNA upstream 234898 15232787 ~ 15236153 (+) False AMCG00012300
TU170470 lncRNA upstream 491709 14974371 ~ 14979342 (+) False AMCG00012300
TU170557 lncRNA downstream 209952 15684478 ~ 15689338 (+) True AMCG00012308
TU170447 lncRNA downstream 327903 15802429 ~ 15806653 (+) True G135666
TU170578 lncRNA downstream 337387 15811913 ~ 15812121 (+) True G135768
TU170590 lncRNA downstream 404608 15879134 ~ 15879504 (+) True G135779
TU170591 lncRNA downstream 404608 15879134 ~ 15900621 (+) False G135779
AMCG00012306 mRNA upstream 40164 15430288 ~ 15430887 (+) True AMCG00012306
AMCG00012303 mRNA upstream 70613 15399433 ~ 15400438 (+) True AMCG00012303
AMCG00012305 mRNA upstream 73670 15396352 ~ 15397381 (+) True AMCG00012305
AMCG00012300 mRNA upstream 336912 14964044 ~ 15134139 (+) False AMCG00012300
AMCG00012298 mRNA upstream 555478 14914584 ~ 14915573 (+) True AMCG00012298
AMCG00012307 mRNA downstream 48986 15523512 ~ 15530379 (+) True AMCG00012307
AMCG00012309 mRNA downstream 168630 15643156 ~ 15679263 (+) True AMCG00012309
AMCG00012308 mRNA downstream 209981 15684507 ~ 15689290 (+) False AMCG00012308
AMCG00012310 mRNA downstream 289503 15764029 ~ 15815714 (+) True AMCG00012310
AMCG00012313 mRNA downstream 414172 15888698 ~ 15896509 (+) True AMCG00012313
TU170424 other upstream 461248 14988298 ~ 15009803 (+) True G135649
TU170413 other upstream 758410 14710244 ~ 14712641 (+) False AMCG00012294
TU170313 other upstream 885281 14584124 ~ 14585770 (+) True G135573
TU170305 other upstream 1035323 14434965 ~ 14435728 (+) True G135566
TU170281 other upstream 1081366 14388075 ~ 14389685 (+) False AMCG00012267
TU170550 other downstream 85378 15559904 ~ 15563836 (+) True G135744
TU170595 other downstream 436722 15911248 ~ 15930848 (+) True G135781
TU170961 other downstream 701873 16176399 ~ 16182668 (+) False AMCG00012318
TU171007 other downstream 775722 16250248 ~ 16259332 (+) True G136076
TU171045 other downstream 919173 16393699 ~ 16432813 (+) True AMCG00012338