RNA id: AMCG00012311


Basic Information

Item Value
RNA id AMCG00012311
length 1449
RNA type mRNA
GC content 0.54
exon number 10
gene id AMCG00012311
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 15864062 ~ 15874730 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTCCTGGCTGTAGCTCCTATCATGCTGAGCTACAGTGTAACGGTGAGGCTGAATAGCAGCAGCCTCTGCGCTGGGAGAGTGGAGGTGCTGTTCGAGGGCCAGTGGGGTCATGTGTGCAGTCACTCCTGGGACCTGCGCGATGCAGAGGTGCTCTGTCAACAGCTGGGCTGTGGGGCGGCAGTGTCGGCACCCCATCTTCTCCGCTCCCAGAATGCCTCTGAGGACAGGGTGCTGAGCAGAGTGCACTGCCTGGGCAACGAGACGGAGCTGGGGCAGTGCAGGGCCGGGCCCCTGGGGGCCAAGGACTGCCAACACCAATGGGACGCATCTGTTATCTGTGCAGATTCTCCGGATGCACAAAAAGCACTGGAAAGTGGAGAGAGCAGAAAACTGAAGCTAGAAACAGCAGCTAGTGGATGTTGTGGCAGAGTGAATGTGTATTACAGAGGCCAGTGGGGAACGATATGCTGGAACCGCTTCGAACTCAAGGAAGCCCATGTGGTCTGTAGACAGGCGGGCTGCGGGGAGGCGCAGTCACTGTTAGCAATGAATATCCCCATCAATGACGTTCCCATCTGGCTGGATCGAGTGCGATGCTCTGGGAACGAGTCGTCTCTCTGGGAGTGTGCCTCCGATCCCTGGGGCCACCATGCCTGCGATCTCAACATGAACGTTCACATTGTGTGTAAAGCTGCTTTAAATTTTGCGTTGCAAAACGGAAACACTCCTTGTGCCGGAAGAGTGCAGTTGAAGACCACAAGCATGACATTCACTTTTCATGATACTCACATTAATAATGAGGTTGCTAATGTTTTGTGTAAGGAAGTGGGCTGTGGATCTATTTCAGTGGTAAGAACAGATGCTTATTTTGGTAAGGTGGCTTTGCCTGTGTGGCAGCCCCCTGTTGACTGTAAAGGGAACGAGTCTTCCTTCTGGACATGTAACGCAGAACTTCTGCCTGCACAACAATGGATGCCTAGTGAATCTGATTTTGCTGGGATTGTGTGCTCGGACCACAGGGAGCCCCGGATCGCAGACGGTGAGGAGCCCTGCTCTGGGAGAGTGGAGCTGCAGTTTGGGGACCAGGGCACGGAGAGGGCTCTGCTGGAGTGCCGCTCCTCCCCCCCGGGTAGTCATGACTGCACACACAAGGAGGACGCAGCTGTGGTCTGCACAGGAGTGAATTTGTCCCACTCTGAGACACAGAACAGCAGAGCTCAGACAACTGCATCAGATGGACCACCAGCTGGCTCATCACACATAGCTGACCTTCCTGAAGATGGATATGACGATGTTGGTGGTGACTTCAGATGGACAGAGGACAGGGAGTCACAGCAGGATGCAGCTTATGATGATATTGAAGAGCAGGATGGTGAGGGTGGGGACAGCGGTGCGTCTCAGTATGATGATATTGGAAACTACCTTGAAAAGGAGGATACAGTGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170872 lncRNA downstream 47891 15813120 ~ 15816171 (-) True G135975
TU170870 lncRNA downstream 52309 15810796 ~ 15811753 (-) True G135973
TU170843 lncRNA downstream 154837 15706934 ~ 15709225 (-) True G135957
TU170789 lncRNA downstream 356410 15504417 ~ 15507652 (-) True G135913
TU170718 lncRNA downstream 1044126 14818855 ~ 14819936 (-) True G135864
TU170894 lncRNA upstream 45529 15920259 ~ 15941294 (-) True G135987
TU170938 lncRNA upstream 226079 16100809 ~ 16101090 (-) True G136024
TU170945 lncRNA upstream 252966 16127696 ~ 16161198 (-) True G136029
TU170958 lncRNA upstream 297029 16171759 ~ 16172088 (-) True G136041
TU170991 lncRNA upstream 340671 16215401 ~ 16217071 (-) True G136066
AMCG00012312 mRNA downstream 60543 15764019 ~ 15803519 (-) True AMCG00012312
AMCG00012304 mRNA downstream 485199 15374349 ~ 15378863 (-) True AMCG00012304
AMCG00012301 mRNA downstream 758926 15064129 ~ 15105136 (-) True AMCG00012301
AMCG00012299 mRNA downstream 813459 14964025 ~ 15050603 (-) True AMCG00012299
AMCG00012295 mRNA downstream 1110053 14744315 ~ 14754009 (-) True AMCG00012295
AMCG00012315 mRNA upstream 9380 15884110 ~ 15885623 (-) True AMCG00012315
AMCG00012314 mRNA upstream 20359 15895089 ~ 15907082 (-) True AMCG00012314
AMCG00012323 mRNA upstream 119033 15993763 ~ 16005231 (-) True AMCG00012323
AMCG00012322 mRNA upstream 174724 16049454 ~ 16054218 (-) True AMCG00012322
AMCG00012328 mRNA upstream 309669 16184399 ~ 16187510 (-) True AMCG00012328
TU170840 other downstream 131928 15706934 ~ 15732134 (-) False G135957
TU170710 other downstream 1069904 14725510 ~ 14794158 (-) True G135857
TU170709 other downstream 1142892 14717472 ~ 14721170 (-) True G135856
TU170666 other downstream 1261260 14599222 ~ 14602802 (-) False AMCG00012292
TU170641 other downstream 1329790 14531473 ~ 14534272 (-) True AMCG00012281
TU170896 other upstream 46874 15921604 ~ 15925153 (-) True G135988
TU170997 other upstream 345396 16220126 ~ 16227243 (-) True G136070
TU171073 other upstream 437991 16312721 ~ 16314393 (-) True G136125
TU171089 other upstream 543462 16418192 ~ 16423900 (-) False AMCG00012340
TU171094 other upstream 556622 16431352 ~ 16432813 (-) False AMCG00012340

Expression Profile