Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00012325 |
| length | 1436 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 10 |
| gene id | AMCG00012325 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 16199003 ~ 16210644 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0015914 | phospholipid transport | biological_process |
| GO:0015695 | organic cation transport | biological_process |
| GO:0015697 | quaternary ammonium group transport | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0005802 | trans-Golgi network | cellular_component |
| GO:0008525 | phosphatidylcholine transporter activity | molecular_function |
| GO:0008526 | phosphatidylinositol transfer activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170969 | lncRNA | upstream | 2889 | 16193975 ~ 16196114 (+) | True | G136051 |
| TU170957 | lncRNA | upstream | 26908 | 16171739 ~ 16172095 (+) | True | G136040 |
| TU170940 | lncRNA | upstream | 62288 | 16131831 ~ 16136715 (+) | True | AMCG00012324 |
| TU170939 | lncRNA | upstream | 95699 | 16102894 ~ 16103304 (+) | True | G136025 |
| TU170591 | lncRNA | upstream | 298382 | 15879134 ~ 15900621 (+) | False | G135779 |
| TU171136 | lncRNA | downstream | 327418 | 16538062 ~ 16539149 (+) | True | G136177 |
| TU171150 | lncRNA | downstream | 355255 | 16565899 ~ 16566231 (+) | True | G136191 |
| TU171156 | lncRNA | downstream | 409611 | 16620255 ~ 16632264 (+) | True | G136195 |
| TU171166 | lncRNA | downstream | 433113 | 16643757 ~ 16648562 (+) | False | AMCG00012348 |
| TU171207 | lncRNA | downstream | 549209 | 16759853 ~ 16765108 (+) | True | AMCG00012351 |
| AMCG00012318 | mRNA | upstream | 15913 | 16176396 ~ 16183090 (+) | True | AMCG00012318 |
| AMCG00012319 | mRNA | upstream | 29287 | 16164268 ~ 16169716 (+) | True | AMCG00012319 |
| AMCG00012320 | mRNA | upstream | 43884 | 16142650 ~ 16155119 (+) | True | AMCG00012320 |
| AMCG00012324 | mRNA | upstream | 56362 | 16104905 ~ 16142641 (+) | False | AMCG00012324 |
| AMCG00012321 | mRNA | upstream | 98142 | 16057853 ~ 16100861 (+) | True | AMCG00012321 |
| AMCG00012327 | mRNA | downstream | 2269 | 16212913 ~ 16226772 (+) | True | AMCG00012327 |
| AMCG00012326 | mRNA | downstream | 77233 | 16287877 ~ 16288823 (+) | True | AMCG00012326 |
| AMCG00012330 | mRNA | downstream | 81627 | 16292271 ~ 16300821 (+) | True | AMCG00012330 |
| AMCG00012332 | mRNA | downstream | 96765 | 16307409 ~ 16316260 (+) | True | AMCG00012332 |
| AMCG00012331 | mRNA | downstream | 136432 | 16347076 ~ 16353476 (+) | True | AMCG00012331 |
| TU170961 | other | upstream | 16335 | 16176399 ~ 16182668 (+) | False | AMCG00012318 |
| TU170595 | other | upstream | 268155 | 15911248 ~ 15930848 (+) | True | G135781 |
| TU170455 | other | upstream | 575122 | 15119725 ~ 15623881 (+) | True | G135670 |
| TU170550 | other | upstream | 635167 | 15559904 ~ 15563836 (+) | True | G135744 |
| TU170537 | other | upstream | 719454 | 15452069 ~ 15479549 (+) | True | AMCG00012302 |
| TU171007 | other | downstream | 39604 | 16250248 ~ 16259332 (+) | True | G136076 |
| TU171045 | other | downstream | 183055 | 16393699 ~ 16432813 (+) | True | AMCG00012338 |
| TU171165 | other | downstream | 433113 | 16643757 ~ 16648562 (+) | True | AMCG00012348 |
| TU171182 | other | downstream | 463635 | 16674279 ~ 16697391 (+) | False | AMCG00012349 |
| TU171221 | other | downstream | 601062 | 16811706 ~ 16863593 (+) | True | G136245 |
