RNA id: AMCG00012359


Basic Information

Item Value
RNA id AMCG00012359
length 453
RNA type mRNA
GC content 0.66
exon number 2
gene id AMCG00012359
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16787004 ~ 16790899 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGACCCCGAGCCAGAAACGCACCACCCGCAGCGTGGCCACTCCGCTGTCCCCAGCCCGCATCACCCGCCtgcaggagaaggaggagctgCAGGACCTAAACGACCGGCTGGCCGTCTACATCGACAAGGTGCGCTCCCTGGAGGCCGAGAACGCCGGGCTTCGGCTGCGCATCACCGAGTCCGAGGAGGAGATCAGCCGCGACCTGTCGGGCATGAAGGCGGCATACGAGACGGAGCTGGCCGACGCCCGCAAGACCCTGGACTCGGTGGCCAAGGAGCGTGCCCGGCTGCAGCTGGAGCTGGGCAAGGTCCGCGAGGAGTACAAGGAGCTGAAGGCCAGGGCACCGTTTCCAGAACAGGAACGGGACCCGGGGACTCCATCCATCACAGCCAAGGGATGCCCTCCAACCAATTTGAGGCGTCATCCCAACTGCCCTCTAGCTGGGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU171191 lncRNA downstream 75371 16709574 ~ 16711633 (-) True G136226
TU171190 lncRNA downstream 82191 16704588 ~ 16704813 (-) True G136225
TU171189 lncRNA downstream 86800 16699989 ~ 16700204 (-) True G136224
TU171164 lncRNA downstream 144391 16642363 ~ 16642613 (-) True G136203
TU171145 lncRNA downstream 234723 16552030 ~ 16552281 (-) True G136186
TU171274 lncRNA upstream 121336 16912235 ~ 16914685 (-) True AMCG00012365
TU171292 lncRNA upstream 165243 16956142 ~ 16956359 (-) True G136307
TU171379 lncRNA upstream 248438 17039337 ~ 17039966 (-) True G136372
TU171383 lncRNA upstream 265713 17056612 ~ 17057001 (-) True G136376
TU171385 lncRNA upstream 273657 17064556 ~ 17098725 (-) True AMCG00012372
AMCG00012353 mRNA downstream 13940 16765074 ~ 16773064 (-) True AMCG00012353
AMCG00012352 mRNA downstream 64957 16718762 ~ 16722047 (-) True AMCG00012352
AMCG00012344 mRNA downstream 276395 16495789 ~ 16510609 (-) True AMCG00012344
AMCG00012346 mRNA downstream 292323 16481950 ~ 16494681 (-) True AMCG00012346
AMCG00012345 mRNA downstream 310802 16446399 ~ 16476202 (-) True AMCG00012345
AMCG00012357 mRNA upstream 38135 16829034 ~ 16841186 (-) True AMCG00012357
AMCG00012358 mRNA upstream 51668 16842567 ~ 16852573 (-) True AMCG00012358
AMCG00012355 mRNA upstream 63337 16854236 ~ 16858406 (-) True AMCG00012355
AMCG00012356 mRNA upstream 72447 16863346 ~ 16875615 (-) True AMCG00012356
AMCG00012365 mRNA upstream 120593 16911492 ~ 16913893 (-) False AMCG00012365
TU171188 other downstream 87213 16699475 ~ 16699791 (-) True G136223
TU171187 other downstream 87894 16698642 ~ 16699110 (-) True G136222
TU171094 other downstream 354191 16431352 ~ 16432813 (-) False AMCG00012340
TU171089 other downstream 363104 16418192 ~ 16423900 (-) False AMCG00012340
TU171073 other downstream 472611 16312721 ~ 16314393 (-) True G136125
TU171387 other upstream 302600 17093499 ~ 17133907 (-) True G136378
TU171432 other upstream 410875 17201774 ~ 17203233 (-) True G136412
TU171434 other upstream 417879 17208778 ~ 17211050 (-) False AMCG00012385
TU171433 other upstream 422945 17213844 ~ 17214963 (-) False AMCG00012385
TU171426 other upstream 443029 17233928 ~ 17242827 (-) True G136408

Expression Profile