RNA id: AMCG00012368



Basic Information


Item Value
RNA id AMCG00012368
length 1277
RNA type mRNA
GC content 0.57
exon number 4
gene id AMCG00012368
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17056530 ~ 17063053 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAATCGTGACTTTCGCAAATACAAATGTGGTGCGCTCATATTGGGCTTTATACGGTATGGCGCTGGCTGTGCAGGGAAGTGGCGCGGCGTAGCGTGTTGTGAGGATGGGGCCGGATGGGGCCTCTCTGTCCGCCTGTGAGTCGAGTCCGTGTCCCGGCCGGTGACAGCGCGTCAGTCCCCTCGGTCCGGACGAGGCAGGCAGACGGGCTCTACCATGACGGAGCCCCGGCTGGTGCTGCTGTTCAGCGGGAAGAGGAAGTCGGGGAAGGACCACATCGCCGAGCTGCTGCGGGAGAGgagAGGAGGCTGGACTTCCACAAGCTGCTGGACTCCAGTGGCTACAAGGAGCAGTACAGGGCTGACATGATCCAGTGGGGGGAGCGGCGCAGGCAGGCGGACCCCGGGCTTGACGCTCGGCGCCGGTCGGACCTGGAGTGGTTCTGGAACCGGTTTGGGGAGCGCAGCCGGACTGTGCGGGTCGAGGCTTCAGAGGACAAACGCAGAGAGAGGGGCTGGGAGTTCACtgcaggtgtggACGACGCCGAGTCAGAATGCGGGCTGGACGAAGGCGTGGCCTTCGATTGGACGATCCACAACGATGGGGACCAGCAGCGATTAGAGGAGCAGCTGAAGGGGCTCCTCTCATTGGCCAGGGAGAGAGCGCAGGCAtaggagaggagggggtgggaATGAAGCAGTGGGGGGACAGGCAACACAGCCTGGGAGAAACTGGGAACTTTATTCCCCTCACTAGACTGCTGGGCCTTTCTCTCTGGTTCGATCCCCCCCCCTCAACTTCTGAAAATGTGGCATACCTGTCCCCCCAGGTCCGGGAGGGATGGGTCTAATTGGCTACCATCCCTTGGCTACCAACTACCTTGAGTTCTCGCCTCCACCCTGGTTTATACAGTGTGTGAATAAAGACATTTGAATATCAGTTCCTGTGTGGGTGGGTGATCGTTTGTCATCTCTGAGGTCTGTATCGGTCACGCACTGGCcgagttcaattaaataaacaacatcaatcaatccattttatttgtatagcgccatTCCCAGGGTAGCCACAGCGCTTTAGAGAGTGGTAAACGTACAACGtaaaattacatacatttcttagcagacgccctgaATTCCAATCATTGCAACATATCCCATGATTTTTACATACCatgacccatttatacaggCTGGGTTTGTACAGTACTGCATTCTGGGTACACTACCTTGCACAGTGTCCCCCActtgggattgaacccacaaccctccactcagcc

Function


GO: NA

KEGG:

id description
K13273 PMVK; phosphomevalonate kinase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU171278 lncRNA upstream 78317 16957458 ~ 16978213 (+) True G136295
TU171280 lncRNA upstream 99235 16956689 ~ 16957295 (+) True G136297
TU171268 lncRNA upstream 141835 16912235 ~ 16914695 (+) True G136286
TU171211 lncRNA upstream 149425 16842567 ~ 16907105 (+) True G136237
TU171209 lncRNA upstream 224728 16829050 ~ 16831802 (+) True G136236
TU171337 lncRNA downstream 64102 17127155 ~ 17209359 (+) False G136341
TU171352 lncRNA downstream 101923 17164976 ~ 17172106 (+) True G136351
TU171462 lncRNA downstream 227092 17290145 ~ 17290529 (+) True G136436
TU171471 lncRNA downstream 237474 17300527 ~ 17304999 (+) True G136444
TU171485 lncRNA downstream 267741 17330794 ~ 17332570 (+) True G136457
AMCG00012370 mRNA upstream 5484 17042195 ~ 17051046 (+) True AMCG00012370
AMCG00012367 mRNA upstream 27442 17022659 ~ 17029088 (+) True AMCG00012367
AMCG00012369 mRNA upstream 59466 16993479 ~ 16997064 (+) True AMCG00012369
AMCG00012366 mRNA upstream 71536 16977572 ~ 16984994 (+) True AMCG00012366
AMCG00012360 mRNA upstream 156095 16877377 ~ 16900435 (+) True AMCG00012360
AMCG00012374 mRNA downstream 64759 17127812 ~ 17129154 (+) False AMCG00012374
AMCG00012375 mRNA downstream 69509 17132562 ~ 17133006 (+) True AMCG00012375
AMCG00012376 mRNA downstream 96392 17159445 ~ 17168083 (+) True AMCG00012376
AMCG00012380 mRNA downstream 122177 17185230 ~ 17193976 (+) True AMCG00012380
AMCG00012381 mRNA downstream 133386 17196439 ~ 17198701 (+) True AMCG00012381
TU171279 other upstream 56441 16963330 ~ 17000089 (+) True G136296
TU171236 other upstream 180930 16871838 ~ 16875600 (+) True G136258
TU171233 other upstream 189082 16866537 ~ 16867448 (+) True G136255
TU171221 other upstream 192937 16811706 ~ 16863593 (+) True G136245
TU171182 other upstream 359139 16674279 ~ 16697391 (+) False AMCG00012349
TU171327 other downstream 62960 17126013 ~ 17129339 (+) True AMCG00012374
TU171339 other downstream 66721 17129774 ~ 17214883 (+) False G136341
TU171331 other downstream 66927 17129980 ~ 17134830 (+) True G136341
TU171333 other downstream 168323 17231376 ~ 17234949 (+) False G136341
TU171338 other downstream 168323 17231376 ~ 17264404 (+) False G136341

Expression Profile