RNA id: AMCG00012373


Basic Information

Item Value
RNA id AMCG00012373
length 267
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00012373
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17080907 ~ 17082207 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGCCATAAAGAAGAAGATGCAGATGCTGAAGCTGGACAAGGAGAACGCCTTGGACCGGGCCGAGCAGGCCGAGGCGGACAAGAAAGCAGCCGAGGAGCGGAGCAAACAGTTGGACAAATACTCCGAGGCGCTGAAGGACGCGCAGGAGAAGCTGGAGCTGGCGGAGAAGAAAGCTGCCGATGGGGGAAACTATGACAGCATCCCTCCAGTATTAACACACAGCTCTCAGCTGGCCACCTGGGCACTGCCGCCAGGCCTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU171383 lncRNA downstream 23906 17056612 ~ 17057001 (-) True G136376
TU171379 lncRNA downstream 40941 17039337 ~ 17039966 (-) True G136372
TU171292 lncRNA downstream 124548 16956142 ~ 16956359 (-) True G136307
TU171274 lncRNA downstream 166222 16912235 ~ 16914685 (-) True AMCG00012365
TU171191 lncRNA downstream 369274 16709574 ~ 16711633 (-) True G136226
TU171391 lncRNA upstream 10336 17092543 ~ 17093357 (-) True G136382
TU171392 lncRNA upstream 20196 17102403 ~ 17103055 (-) False G136383
TU171394 lncRNA upstream 20196 17102403 ~ 17104457 (-) True G136383
TU171407 lncRNA upstream 43999 17126206 ~ 17129299 (-) True G136392
TU171386 lncRNA upstream 50030 17132237 ~ 17133907 (-) False G136378
AMCG00012372 mRNA downstream 1700 17065337 ~ 17079207 (-) False AMCG00012372
AMCG00012371 mRNA downstream 90798 16985862 ~ 16990109 (-) True AMCG00012371
AMCG00012364 mRNA downstream 115036 16960383 ~ 16965871 (-) True AMCG00012364
AMCG00012361 mRNA downstream 129076 16945305 ~ 16951831 (-) True AMCG00012361
AMCG00012362 mRNA downstream 156923 16922806 ~ 16923984 (-) True AMCG00012362
AMCG00012385 mRNA upstream 126608 17208815 ~ 17217639 (-) True AMCG00012385
AMCG00012384 mRNA upstream 163883 17246090 ~ 17254514 (-) True AMCG00012384
AMCG00012383 mRNA upstream 182556 17264763 ~ 17267311 (-) True AMCG00012383
AMCG00012390 mRNA upstream 262147 17344354 ~ 17364449 (-) True AMCG00012390
AMCG00012391 mRNA upstream 298449 17380656 ~ 17380934 (-) False AMCG00012391
TU171188 other downstream 381116 16699475 ~ 16699791 (-) True G136223
TU171187 other downstream 381797 16698642 ~ 16699110 (-) True G136222
TU171094 other downstream 648094 16431352 ~ 16432813 (-) False AMCG00012340
TU171089 other downstream 657007 16418192 ~ 16423900 (-) False AMCG00012340
TU171073 other downstream 766514 16312721 ~ 16314393 (-) True G136125
TU171387 other upstream 11292 17093499 ~ 17133907 (-) True G136378
TU171432 other upstream 119567 17201774 ~ 17203233 (-) True G136412
TU171434 other upstream 126571 17208778 ~ 17211050 (-) False AMCG00012385
TU171433 other upstream 131637 17213844 ~ 17214963 (-) False AMCG00012385
TU171426 other upstream 151721 17233928 ~ 17242827 (-) True G136408

Expression Profile