RNA id: AMCG00012391


Basic Information

Item Value
RNA id AMCG00012391
length 279
RNA type mRNA
GC content 0.67
exon number 1
gene id AMCG00012391
representative False

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17380180 ~ 17381595 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACCAAGCTGGCAGAGTGGCTGCTGGGGCTGTCCACGCTGGGGGTCCTGTGGGGGGTGGTGACCTTCGACCTGCTGGGCCTGGAGCTGCCGGGGTCCTACCGAGAGGTGGCCTGGCCGCTGCCCGTGTACCTGCTGGTCTGCTTCGGCTGCTACTCTCTGGCCACGGTGGGCTACAGGGTGGCCACGTTTAACGACTGCGAGGCGGCTGCCCAGGAGCTGCAGGAGCAGATCCAGGAGGCCCGGAGAGACCTGAAGAGCAGGGGCCTGAGGCTCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU171498 lncRNA downstream 28745 17350820 ~ 17351911 (-) True G136469
TU171500 lncRNA downstream 62177 17314908 ~ 17318479 (-) True G136470
TU171477 lncRNA downstream 70606 17302926 ~ 17310050 (-) True G136450
TU171463 lncRNA downstream 90260 17290140 ~ 17290396 (-) True G136437
TU171461 lncRNA downstream 90573 17289099 ~ 17290083 (-) True G136435
TU171574 lncRNA upstream 21045 17401979 ~ 17402366 (-) True G136517
TU171575 lncRNA upstream 21503 17402437 ~ 17402721 (-) True G136518
TU171591 lncRNA upstream 34993 17415927 ~ 17416475 (-) True G136521
TU171601 lncRNA upstream 66596 17447530 ~ 17448098 (-) True G136525
TU171614 lncRNA upstream 86955 17467889 ~ 17469776 (-) True G136536
AMCG00012390 mRNA downstream 16207 17344354 ~ 17364449 (-) True AMCG00012390
AMCG00012383 mRNA downstream 113345 17264763 ~ 17267311 (-) True AMCG00012383
AMCG00012384 mRNA downstream 126142 17246090 ~ 17254514 (-) True AMCG00012384
AMCG00012385 mRNA downstream 163017 17208815 ~ 17217639 (-) True AMCG00012385
AMCG00012373 mRNA downstream 298449 17080907 ~ 17082207 (-) True AMCG00012373
AMCG00012393 mRNA upstream 36565 17417499 ~ 17423232 (-) False AMCG00012393
AMCG00012394 mRNA upstream 78989 17459923 ~ 17465336 (-) True AMCG00012394
AMCG00012392 mRNA upstream 94440 17475374 ~ 17483359 (-) True AMCG00012392
AMCG00012399 mRNA upstream 126990 17507924 ~ 17511092 (-) True AMCG00012399
AMCG00012398 mRNA upstream 138721 17519655 ~ 17523079 (-) True AMCG00012398
TU171426 other downstream 137829 17233928 ~ 17242827 (-) True G136408
TU171433 other downstream 165693 17213844 ~ 17214963 (-) False AMCG00012385
TU171434 other downstream 169606 17208778 ~ 17211050 (-) False AMCG00012385
TU171432 other downstream 177423 17201774 ~ 17203233 (-) True G136412
TU171387 other downstream 246749 17093499 ~ 17133907 (-) True G136378
TU171593 other upstream 35640 17416574 ~ 17434113 (-) True AMCG00012393
TU171623 other upstream 122684 17503618 ~ 17503986 (-) True G136544
TU171745 other upstream 305398 17686332 ~ 17688512 (-) True G136625
TU171807 other upstream 339792 17720726 ~ 17724068 (-) True G136666
TU171825 other upstream 379045 17759979 ~ 17761454 (-) False AMCG00012416

Expression Profile