RNA id: AMCG00012393


Basic Information

Item Value
RNA id AMCG00012393
length 369
RNA type mRNA
GC content 0.60
exon number 3
gene id AMCG00012393
representative False

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17416574 ~ 17434113 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTAGTGCCGGTCTGCGGAGGGAGGGCTACACAGTGCAGGTGAACGTCAATGACTACCTAGACATCTACTGCCCGCACTACAACAGCTCGGCGGGGGGTTCGTCCGGGGGTCTGCGTGGGGGCGAGCAGTACGTGCTGTACATGGTGAGCTCTGAGGGGTACCGCTCCTGCGACCCCTCGCTGGGCTTCAAGCGCTGGGAGTGCAACCGGCCACACGCCCCCCACGCGCCCATCAAtcacacacacacacacacacaccgggaTGGACAGAaaagacggacagacagacagatggaagGAACACTGAGCGAGACGCCAAAACACCCACACAACATaagtgcgtgtgcgtgtgtgactgAACTTTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU171591 lncRNA downstream 1024 17415927 ~ 17416475 (-) True G136521
TU171575 lncRNA downstream 14778 17402437 ~ 17402721 (-) True G136518
TU171574 lncRNA downstream 15133 17401979 ~ 17402366 (-) True G136517
TU171498 lncRNA downstream 65588 17350820 ~ 17351911 (-) True G136469
TU171500 lncRNA downstream 99020 17314908 ~ 17318479 (-) True G136470
TU171601 lncRNA upstream 24298 17447530 ~ 17448098 (-) True G136525
TU171614 lncRNA upstream 44657 17467889 ~ 17469776 (-) True G136536
TU171588 lncRNA upstream 51416 17474648 ~ 17479465 (-) False AMCG00012392
TU171624 lncRNA upstream 80951 17504183 ~ 17505377 (-) True G136545
TU171678 lncRNA upstream 90348 17513580 ~ 17514289 (-) True G136574
AMCG00012391 mRNA downstream 36565 17380656 ~ 17380934 (-) False AMCG00012391
AMCG00012390 mRNA downstream 53050 17344354 ~ 17364449 (-) True AMCG00012390
AMCG00012383 mRNA downstream 150188 17264763 ~ 17267311 (-) True AMCG00012383
AMCG00012384 mRNA downstream 162985 17246090 ~ 17254514 (-) True AMCG00012384
AMCG00012385 mRNA downstream 199860 17208815 ~ 17217639 (-) True AMCG00012385
AMCG00012394 mRNA upstream 36691 17459923 ~ 17465336 (-) True AMCG00012394
AMCG00012392 mRNA upstream 52142 17475374 ~ 17483359 (-) True AMCG00012392
AMCG00012399 mRNA upstream 84692 17507924 ~ 17511092 (-) True AMCG00012399
AMCG00012398 mRNA upstream 96423 17519655 ~ 17523079 (-) True AMCG00012398
AMCG00012400 mRNA upstream 103643 17526875 ~ 17527534 (-) True AMCG00012400
TU171572 other downstream 35904 17380180 ~ 17381595 (-) True AMCG00012391
TU171426 other downstream 174672 17233928 ~ 17242827 (-) True G136408
TU171433 other downstream 202536 17213844 ~ 17214963 (-) False AMCG00012385
TU171434 other downstream 206449 17208778 ~ 17211050 (-) False AMCG00012385
TU171432 other downstream 214266 17201774 ~ 17203233 (-) True G136412
TU171623 other upstream 80386 17503618 ~ 17503986 (-) True G136544
TU171745 other upstream 263100 17686332 ~ 17688512 (-) True G136625
TU171807 other upstream 297494 17720726 ~ 17724068 (-) True G136666
TU171825 other upstream 336747 17759979 ~ 17761454 (-) False AMCG00012416
TU171826 other upstream 344828 17768060 ~ 17770966 (-) False AMCG00012414

Expression Profile