Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00012413 |
| length | 959 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 6 |
| gene id | AMCG00012413 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17689118 ~ 17691283 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K13250 | SSR2; translocon-associated protein subunit beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU171670 | lncRNA | upstream | 24948 | 17663433 ~ 17664170 (+) | True | G136571 |
| TU171665 | lncRNA | upstream | 35656 | 17649265 ~ 17653462 (+) | False | G136569 |
| TU171663 | lncRNA | upstream | 40011 | 17648628 ~ 17649107 (+) | True | G136568 |
| TU171659 | lncRNA | upstream | 53157 | 17623113 ~ 17635961 (+) | True | G136564 |
| TU171618 | lncRNA | upstream | 199574 | 17489319 ~ 17489544 (+) | True | G136539 |
| TU171869 | lncRNA | downstream | 209625 | 17900908 ~ 17901656 (+) | True | G136718 |
| TU172036 | lncRNA | downstream | 570614 | 18261897 ~ 18269507 (+) | True | G136842 |
| TU172043 | lncRNA | downstream | 603932 | 18295215 ~ 18317076 (+) | True | G136848 |
| TU172070 | lncRNA | downstream | 742287 | 18433570 ~ 18470784 (+) | False | G136866 |
| TU172069 | lncRNA | downstream | 776523 | 18467806 ~ 18470784 (+) | True | G136866 |
| AMCG00012410 | mRNA | upstream | 647 | 17683394 ~ 17688471 (+) | True | AMCG00012410 |
| AMCG00012402 | mRNA | upstream | 9153 | 17676665 ~ 17679965 (+) | True | AMCG00012402 |
| AMCG00012403 | mRNA | upstream | 12762 | 17667343 ~ 17676356 (+) | True | AMCG00012403 |
| AMCG00012405 | mRNA | upstream | 26361 | 17657458 ~ 17662757 (+) | True | AMCG00012405 |
| AMCG00012407 | mRNA | upstream | 67931 | 17614494 ~ 17621187 (+) | True | AMCG00012407 |
| AMCG00012412 | mRNA | downstream | 8863 | 17700146 ~ 17713310 (+) | True | AMCG00012412 |
| AMCG00012411 | mRNA | downstream | 39714 | 17730997 ~ 17751455 (+) | True | AMCG00012411 |
| AMCG00012417 | mRNA | downstream | 64423 | 17755706 ~ 17760282 (+) | True | AMCG00012417 |
| AMCG00012423 | mRNA | downstream | 101243 | 17792526 ~ 17795244 (+) | True | AMCG00012423 |
| AMCG00012418 | mRNA | downstream | 115276 | 17806559 ~ 17814564 (+) | True | AMCG00012418 |
| TU171664 | other | upstream | 35656 | 17650767 ~ 17653462 (+) | True | G136569 |
| TU171661 | other | upstream | 42213 | 17645641 ~ 17646905 (+) | True | G136566 |
| TU171641 | other | upstream | 141150 | 17547368 ~ 17547968 (+) | True | G136558 |
| TU171630 | other | upstream | 170720 | 17517450 ~ 17518398 (+) | False | AMCG00012401 |
| TU171527 | other | upstream | 213021 | 17474648 ~ 17476097 (+) | False | G136489 |
| TU171766 | other | downstream | 64137 | 17755420 ~ 17757687 (+) | False | AMCG00012417 |
| TU171770 | other | downstream | 72862 | 17764145 ~ 17767531 (+) | True | G136641 |
| TU171771 | other | downstream | 72862 | 17764145 ~ 17766491 (+) | False | G136641 |
| TU171753 | other | downstream | 100968 | 17792251 ~ 17795217 (+) | False | AMCG00012423 |
| TU171793 | other | downstream | 149650 | 17840933 ~ 17843921 (+) | True | G136658 |
