RNA id: AMCG00012482


Basic Information

Item Value
RNA id AMCG00012482
length 219
RNA type mRNA
GC content 0.40
exon number 3
gene id AMCG00012482
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19300495 ~ 19323213 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atgaatagaagagaaaagacaaagaagagaaaaggaaaagaagaaggctgtaaaggaaagagaagaaaagaagcCAAGAAAACAGTCACAGCTGATAAGATCACTGAGGAAGACAGACATTACATTGGACATGAGGTTGGCCTTGCAGTGGAGTATATCCACTCCAAAAACATAATCCACCAGGACATCAAGCCAGCTAATATCCTGGTGAACTCATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU172337 lncRNA downstream 119137 19179139 ~ 19181358 (-) True G137094
TU172243 lncRNA downstream 370354 18927379 ~ 18930141 (-) True AMCG00012467
TU172240 lncRNA downstream 374152 18925545 ~ 18926343 (-) True G137014
TU172233 lncRNA downstream 397657 18902473 ~ 18902838 (-) True G137008
TU172222 lncRNA downstream 513340 18786956 ~ 18787155 (-) True G136997
TU172507 lncRNA upstream 181671 19504884 ~ 19509198 (-) False G137214
TU172533 lncRNA upstream 294314 19617527 ~ 19622445 (-) True G137232
TU172504 lncRNA upstream 303271 19626484 ~ 19635067 (-) True G137214
TU172553 lncRNA upstream 444915 19768128 ~ 19774086 (-) True G137248
TU172579 lncRNA upstream 576993 19900206 ~ 19900440 (-) True G137270
AMCG00012477 mRNA downstream 49083 19207349 ~ 19251412 (-) True AMCG00012477
AMCG00012478 mRNA downstream 95753 19196597 ~ 19204742 (-) True AMCG00012478
AMCG00012475 mRNA downstream 180487 19116298 ~ 19120008 (-) True AMCG00012475
AMCG00012472 mRNA downstream 257128 19032803 ~ 19043367 (-) False AMCG00012472
AMCG00012473 mRNA downstream 274400 19019495 ~ 19026095 (-) True AMCG00012473
AMCG00012485 mRNA upstream 92734 19415947 ~ 19417276 (-) True AMCG00012485
AMCG00012490 mRNA upstream 187024 19510237 ~ 19517748 (-) True AMCG00012490
AMCG00012491 mRNA upstream 210267 19533480 ~ 19537105 (-) True AMCG00012491
AMCG00012494 mRNA upstream 263551 19586764 ~ 19590264 (-) True AMCG00012494
AMCG00012499 mRNA upstream 480413 19803626 ~ 19813830 (-) True AMCG00012499
TU172290 other downstream 257046 19032603 ~ 19043449 (-) True AMCG00012472
TU172106 other downstream 922198 18375330 ~ 18378297 (-) True G136900
TU172031 other downstream 1063239 18205375 ~ 18237256 (-) True G136837
TU171956 other downstream 1199868 18098180 ~ 18100627 (-) True AMCG00012437
TU171826 other downstream 1529529 17768060 ~ 17770966 (-) False AMCG00012414
TU172487 other upstream 118714 19441927 ~ 19507394 (-) True G137199
TU172548 other upstream 390949 19714162 ~ 19793531 (-) True G137246
TU172550 other upstream 421122 19744335 ~ 19793531 (-) False G137246
TU172597 other upstream 581209 19904422 ~ 19910378 (-) False AMCG00012503
TU172771 other upstream 937789 20261002 ~ 20270864 (-) True G137408