RNA id: AMCG00012564


Basic Information

Item Value
RNA id AMCG00012564
length 330
RNA type mRNA
GC content 0.47
exon number 2
gene id AMCG00012564
representative False

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22078173 ~ 22088469 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCAGgtctttttctcttctctcaaCAGCACTCAGACCTGGAGAAGGCCATTAATACTCTGGTCACCGAGTTCCATGCTGCTGCAGGTGATAATGGCAGTACGCTAAAGAGCAACGAGTTCAAAAGTCTCCTTTCCAGCCAGCTGCCCAACTTAGTCAAGGGTGTTAATGATGACCAGCTCATGGGAGACCTGATGAAGAAGCTGAACATCAAAGACAGTGAGGGGATCACCTTTAAAGAGTTCTGGGGATTAATTCAGCAACTGGCTACATCTCAGCATGGCCTGACCAGCCGAGACAAATCTGCAAAGTCTTGCCAGATCTTGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173331 lncRNA downstream 1926 22075685 ~ 22076815 (-) True G137828
TU173230 lncRNA downstream 391477 21687030 ~ 21687264 (-) True G137742
TU173220 lncRNA downstream 420999 21650763 ~ 21657742 (-) True G137733
TU173193 lncRNA downstream 652496 21425171 ~ 21426245 (-) True G137709
TU173196 lncRNA downstream 713817 21364292 ~ 21364924 (-) True G137711
TU173350 lncRNA upstream 45216 22127945 ~ 22128292 (-) True G137842
TU173355 lncRNA upstream 98102 22180831 ~ 22181039 (-) True G137847
TU173385 lncRNA upstream 225712 22308441 ~ 22326347 (-) True G137870
TU173460 lncRNA upstream 641248 22723977 ~ 22724234 (-) True G137934
TU173467 lncRNA upstream 688195 22770924 ~ 22771248 (-) True G137941
AMCG00012563 mRNA downstream 39507 22027618 ~ 22039234 (-) True AMCG00012563
AMCG00012562 mRNA downstream 338369 21738956 ~ 21740372 (-) True AMCG00012562
AMCG00012561 mRNA downstream 374773 21700051 ~ 21703968 (-) True AMCG00012561
AMCG00012559 mRNA downstream 443315 21609574 ~ 21635426 (-) False AMCG00012559
AMCG00012556 mRNA downstream 581554 21494227 ~ 21497187 (-) False AMCG00012556
AMCG00012566 mRNA upstream 21940 22104669 ~ 22120095 (-) False AMCG00012566
AMCG00012565 mRNA upstream 69690 22152419 ~ 22165738 (-) True AMCG00012565
AMCG00012572 mRNA upstream 505411 22588140 ~ 22601168 (-) True AMCG00012572
AMCG00012574 mRNA upstream 519449 22602178 ~ 22608156 (-) True AMCG00012574
AMCG00012573 mRNA upstream 549214 22631943 ~ 22640196 (-) True AMCG00012573
TU173202 other downstream 459971 21433664 ~ 21618770 (-) True AMCG00012559
TU173211 other downstream 576542 21496679 ~ 21502199 (-) True AMCG00012556
TU173044 other downstream 1036298 21040089 ~ 21042443 (-) True AMCG00012541
TU173042 other downstream 1040310 21035163 ~ 21038431 (-) True G137608
TU172771 other downstream 1807877 20261002 ~ 20270864 (-) True G137408
TU173344 other upstream 20924 22103653 ~ 22120556 (-) True AMCG00012566
TU173508 other upstream 839154 22921883 ~ 23049378 (-) True G137974
TU173535 other upstream 1020738 23103467 ~ 23120688 (-) True G137996
TU173691 other upstream 1690774 23773503 ~ 23773998 (-) False AMCG00012594
TU173837 other upstream 2151775 24234504 ~ 24234867 (-) True G138207

Expression Profile