RNA id: AMCG00012571


Basic Information

Item Value
RNA id AMCG00012571
length 368
RNA type mRNA
GC content 0.41
exon number 3
gene id AMCG00012571
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22452135 ~ 22455561 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGTCAGTTCTCAGGTGCAAGTTTCCCAGATGCCATCATTTTTCTTCATAAGTGAAGGGGCAAATAAAAATCCACAGAAAGTATTGGTGCTAGCAAGTGGATCAACAGATGTAGTGTCAGGAAACCAGTTCAGTGCATCACTGGATGAGAAAAATAAGACTGGTGTGAGATCTCAGATTCAGGTAATGCAGACACCAACATCACTTACTGTGACTGAAGGGGAGACTACAACCCTGAATTGCAGATATacaactttttcttcttttcgcAGTCTGCAATGGTACAGACAGAGGCCACAGAAATGGccagaaaacattttgataaaAAAGGAAGACAGACAGTTCAGTGGTTCTTTGGatgagataaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173364 lncRNA upstream 125785 22308413 ~ 22326350 (+) True G137851
TU173330 lncRNA upstream 375265 22075843 ~ 22076870 (+) True G137827
TU173317 lncRNA upstream 446457 22005381 ~ 22005678 (+) True G137814
TU173251 lncRNA upstream 493781 21836242 ~ 21958354 (+) True G137761
TU173479 lncRNA downstream 465628 22921189 ~ 22922372 (+) True G137951
TU173477 lncRNA downstream 465948 22921509 ~ 22922336 (+) False G137951
TU173523 lncRNA downstream 602525 23058086 ~ 23058391 (+) True G137984
TU173550 lncRNA downstream 707430 23162991 ~ 23163619 (+) True G138010
TU173574 lncRNA downstream 820103 23275664 ~ 23275950 (+) True G138034
AMCG00012570 mRNA upstream 22075 22390202 ~ 22430060 (+) True AMCG00012570
AMCG00012568 mRNA upstream 122389 22320914 ~ 22329746 (+) True AMCG00012568
AMCG00012569 mRNA upstream 131707 22220633 ~ 22320428 (+) True AMCG00012569
AMCG00012567 mRNA upstream 258494 22172285 ~ 22193641 (+) True AMCG00012567
AMCG00012558 mRNA upstream 798835 21647378 ~ 21653300 (+) True AMCG00012558
AMCG00012577 mRNA downstream 130140 22585701 ~ 22588205 (+) True AMCG00012577
AMCG00012576 mRNA downstream 209920 22665481 ~ 22669344 (+) True AMCG00012576
AMCG00012581 mRNA downstream 404518 22860079 ~ 22862823 (+) True AMCG00012581
AMCG00012579 mRNA downstream 424798 22880359 ~ 22911656 (+) True AMCG00012579
AMCG00012580 mRNA downstream 480709 22936270 ~ 22950900 (+) True AMCG00012580
TU173274 other upstream 493977 21932295 ~ 21958158 (+) True G137775
TU173256 other upstream 575593 21854706 ~ 21876542 (+) False G137764
TU173102 other upstream 1135684 21303225 ~ 21316451 (+) True G137644
TU173076 other upstream 1158730 21270360 ~ 21293405 (+) False G137629
TU173071 other upstream 1175399 21270360 ~ 21276736 (+) True G137629
TU173418 other downstream 109863 22565424 ~ 22566106 (+) True G137899
TU173473 other downstream 362392 22817953 ~ 22818458 (+) True G137947
TU173480 other downstream 431977 22887538 ~ 22888056 (+) False AMCG00012579
TU173653 other downstream 1253957 23709518 ~ 23742591 (+) False AMCG00012593