RNA id: AMCG00012581



Basic Information


Item Value
RNA id AMCG00012581
length 324
RNA type mRNA
GC content 0.40
exon number 2
gene id AMCG00012581
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22860079 ~ 22862823 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATCTGTTCCACAatttaaCCCGGGGAGACAAAATCTCTTCTGAAAAAAATGAGATCTCTGCAGAAGAAGGTGCATCGGTAACATTAAAATGCTCTTATTCAACCAATGATACTGGAGCCTATCTCTTCTGGTACCGACAGTTTCCTAACAGTGCTCTGCAATACATTGTAATGAGAGGAGCTGGAACTTGCAGTTCAGTGAATCAAAAGAGTTATTTATTGACAGAGCGTTTCTCTTCAATAGCTGAAAAAGATTTGACCATCTTCAAAATCTCCAGACTGCAATTCAGTGATTCAGGAACACTGCCACAGCATGGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU173364 lncRNA upstream 533729 22308413 ~ 22326350 (+) True G137851
TU173330 lncRNA upstream 783209 22075843 ~ 22076870 (+) True G137827
TU173317 lncRNA upstream 854401 22005381 ~ 22005678 (+) True G137814
TU173251 lncRNA upstream 901725 21836242 ~ 21958354 (+) True G137761
TU173479 lncRNA downstream 58366 22921189 ~ 22922372 (+) True G137951
TU173477 lncRNA downstream 58686 22921509 ~ 22922336 (+) False G137951
TU173523 lncRNA downstream 195263 23058086 ~ 23058391 (+) True G137984
TU173550 lncRNA downstream 300168 23162991 ~ 23163619 (+) True G138010
TU173574 lncRNA downstream 412841 23275664 ~ 23275950 (+) True G138034
AMCG00012576 mRNA upstream 190735 22665481 ~ 22669344 (+) True AMCG00012576
AMCG00012577 mRNA upstream 271874 22585701 ~ 22588205 (+) True AMCG00012577
AMCG00012571 mRNA upstream 404518 22452135 ~ 22455561 (+) True AMCG00012571
AMCG00012570 mRNA upstream 430019 22390202 ~ 22430060 (+) True AMCG00012570
AMCG00012568 mRNA upstream 530333 22320914 ~ 22329746 (+) True AMCG00012568
AMCG00012579 mRNA downstream 17536 22880359 ~ 22911656 (+) True AMCG00012579
AMCG00012580 mRNA downstream 73447 22936270 ~ 22950900 (+) True AMCG00012580
AMCG00012578 mRNA downstream 98375 22961198 ~ 22966195 (+) True AMCG00012578
AMCG00012583 mRNA downstream 179665 23042488 ~ 23092426 (+) True AMCG00012583
AMCG00012585 mRNA downstream 324064 23186887 ~ 23230915 (+) True AMCG00012585
TU173473 other upstream 41621 22817953 ~ 22818458 (+) True G137947
TU173418 other upstream 293973 22565424 ~ 22566106 (+) True G137899
TU173274 other upstream 901921 21932295 ~ 21958158 (+) True G137775
TU173256 other upstream 983537 21854706 ~ 21876542 (+) False G137764
TU173102 other upstream 1543628 21303225 ~ 21316451 (+) True G137644
TU173480 other downstream 24715 22887538 ~ 22888056 (+) False AMCG00012579
TU173653 other downstream 846695 23709518 ~ 23742591 (+) False AMCG00012593

Expression Profile