RNA id: AMCG00012589



Basic Information


Item Value
RNA id AMCG00012589
length 333
RNA type mRNA
GC content 0.43
exon number 2
gene id AMCG00012589
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23554060 ~ 23561816 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCAGAGACTTCACTACTCTCACCATTTCAGGTCTTACTCTTGAAGACAATGCTGTGTATCACTGTGCTCTGAGGGACTCCATCAAATCTGAAGAGACACAGATCGCCAAGAAAGAAGGGGAATCAGTGACTCTGAACTGCTCTTACTCTTCAAGcagtcaaaatattattttttactggtACCGTCAGTATTCAACCCAGACACCAgaatatattctgtataaagAAGCCCGCTCTTGTAGCCAGTATTCTGATACTGCTCTCTTTGCTCAAGAACGGTGTAGATCTACAGCAGGTCAAGATTCCACCACACTCAGCATTTCTTACTCTGAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU173574 lncRNA upstream 278110 23275664 ~ 23275950 (+) True G138034
TU173550 lncRNA upstream 390441 23162991 ~ 23163619 (+) True G138010
TU173523 lncRNA upstream 495669 23058086 ~ 23058391 (+) True G137984
TU173479 lncRNA upstream 631688 22921189 ~ 22922372 (+) True G137951
TU173588 lncRNA downstream 236790 23798606 ~ 23843211 (+) False G138042
TU173617 lncRNA downstream 242811 23804627 ~ 23843211 (+) False G138042
TU173613 lncRNA downstream 244849 23806665 ~ 23843211 (+) True G138042
TU173596 lncRNA downstream 259239 23821055 ~ 23843211 (+) False G138042
TU173612 lncRNA downstream 267838 23829654 ~ 23843211 (+) False G138042
AMCG00012588 mRNA upstream 37678 23485618 ~ 23516382 (+) True AMCG00012588
AMCG00012586 mRNA upstream 131782 23417601 ~ 23422278 (+) True AMCG00012586
AMCG00012585 mRNA upstream 323145 23186887 ~ 23230915 (+) True AMCG00012585
AMCG00012583 mRNA upstream 461634 23042488 ~ 23092426 (+) True AMCG00012583
AMCG00012578 mRNA upstream 587865 22961198 ~ 22966195 (+) True AMCG00012578
AMCG00012591 mRNA downstream 66644 23628460 ~ 23649841 (+) True AMCG00012591
AMCG00012592 mRNA downstream 101412 23663228 ~ 23689541 (+) True AMCG00012592
AMCG00012593 mRNA downstream 135608 23697424 ~ 23710070 (+) True AMCG00012593
AMCG00012595 mRNA downstream 298013 23859829 ~ 23899337 (+) True AMCG00012595
AMCG00012596 mRNA downstream 390376 23952192 ~ 23976569 (+) True AMCG00012596
TU173480 other upstream 666004 22887538 ~ 22888056 (+) False AMCG00012579
TU173473 other upstream 735602 22817953 ~ 22818458 (+) True G137947
TU173418 other upstream 987954 22565424 ~ 22566106 (+) True G137899
TU173274 other upstream 1595902 21932295 ~ 21958158 (+) True G137775
TU173256 other upstream 1677518 21854706 ~ 21876542 (+) False G137764
TU173653 other downstream 147702 23709518 ~ 23742591 (+) False AMCG00012593

Expression Profile