RNA id: AMCG00012592


Basic Information

Item Value
RNA id AMCG00012592
length 198
RNA type mRNA
GC content 0.41
exon number 4
gene id AMCG00012592
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23663228 ~ 23689541 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAAGTTAGCTTGGGGCAAGAAGCTATAACTCCGCAGTCTTCCAAAGTCACTGCAAAAGAAGGACAGACGGCTGCCATTCAGTGCAATTATAAGGCTGAAAAGAGCTATGGAGCATACTTACAGTGGTACAAAGTTGACAAAAATGAAGGGGGAAATGCTAACCTTCAggtttttcagaaaaatatcGTGatatGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173574 lncRNA upstream 387278 23275664 ~ 23275950 (+) True G138034
TU173550 lncRNA upstream 499609 23162991 ~ 23163619 (+) True G138010
TU173523 lncRNA upstream 604837 23058086 ~ 23058391 (+) True G137984
TU173479 lncRNA upstream 740856 22921189 ~ 22922372 (+) True G137951
TU173588 lncRNA downstream 109065 23798606 ~ 23843211 (+) False G138042
TU173617 lncRNA downstream 115086 23804627 ~ 23843211 (+) False G138042
TU173613 lncRNA downstream 117124 23806665 ~ 23843211 (+) True G138042
TU173596 lncRNA downstream 131514 23821055 ~ 23843211 (+) False G138042
TU173612 lncRNA downstream 140113 23829654 ~ 23843211 (+) False G138042
AMCG00012591 mRNA upstream 13387 23628460 ~ 23649841 (+) True AMCG00012591
AMCG00012589 mRNA upstream 101412 23554060 ~ 23561816 (+) True AMCG00012589
AMCG00012588 mRNA upstream 146846 23485618 ~ 23516382 (+) True AMCG00012588
AMCG00012586 mRNA upstream 240950 23417601 ~ 23422278 (+) True AMCG00012586
AMCG00012585 mRNA upstream 432313 23186887 ~ 23230915 (+) True AMCG00012585
AMCG00012593 mRNA downstream 7883 23697424 ~ 23710070 (+) True AMCG00012593
AMCG00012595 mRNA downstream 170288 23859829 ~ 23899337 (+) True AMCG00012595
AMCG00012596 mRNA downstream 262651 23952192 ~ 23976569 (+) True AMCG00012596
AMCG00012599 mRNA downstream 354414 24043955 ~ 24069451 (+) True AMCG00012599
AMCG00012598 mRNA downstream 526826 24216367 ~ 24222350 (+) True AMCG00012598
TU173480 other upstream 775172 22887538 ~ 22888056 (+) False AMCG00012579
TU173473 other upstream 844770 22817953 ~ 22818458 (+) True G137947
TU173418 other upstream 1097122 22565424 ~ 22566106 (+) True G137899
TU173274 other upstream 1705070 21932295 ~ 21958158 (+) True G137775
TU173256 other upstream 1786686 21854706 ~ 21876542 (+) False G137764
TU173653 other downstream 19977 23709518 ~ 23742591 (+) False AMCG00012593

Expression Profile