RNA id: TU167873



Basic Information


Item Value
RNA id TU167873
length 281
RNA type TUCP
GC content 0.57
exon number 3
gene id G133822
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8052124 ~ 8055021 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCAGCAGTGACACAGACGGAGGGCAGGGAGACGATGGCACAGCGGAATACAGGGCTCTCCTCACCCACAGTGTTCATGTACTACACCGGGGGCACCGTGGGCATGGTCCATGGGCAAGAcgGAGAACATCCAGGACAACCAGGTGAATTCACCAAGGAGCTCCAAAACCACCCTGAGCTCTACAGCAAGAAGGACAATGGGTGGTTCCTTTTGCCGCGGAAGGCATTTGGTGAGTGTGGAGAATTTGCCTCAGTGAAGTACCAGGTGGAGGAGGTGCTGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU167871 lncRNA upstream 48612 8002780 ~ 8003512 (+) True G133820
TU167857 lncRNA upstream 125898 7925136 ~ 7926226 (+) False AMCG00011987
TU167816 lncRNA upstream 208653 7830564 ~ 7843471 (+) True G133783
TU167649 lncRNA upstream 476959 7551295 ~ 7575165 (+) True G133665
TU167675 lncRNA upstream 504369 7546644 ~ 7547755 (+) True G133682
TU167877 lncRNA downstream 7572 8062593 ~ 8117249 (+) True G133825
TU167884 lncRNA downstream 24734 8079755 ~ 8100437 (+) True G133832
TU167885 lncRNA downstream 65878 8120899 ~ 8124699 (+) True G133833
TU168009 lncRNA downstream 141798 8196819 ~ 8197029 (+) True G133921
TU168042 lncRNA downstream 221354 8276375 ~ 8276580 (+) True G133947
AMCG00011993 mRNA upstream 14443 8029486 ~ 8037681 (+) True AMCG00011993
AMCG00011994 mRNA upstream 27063 8020804 ~ 8025061 (+) True AMCG00011994
AMCG00011992 mRNA upstream 35237 7999228 ~ 8016887 (+) True AMCG00011992
AMCG00011986 mRNA upstream 76027 7970457 ~ 7976097 (+) True AMCG00011986
AMCG00011985 mRNA upstream 97111 7931795 ~ 7955013 (+) True AMCG00011985
AMCG00012006 mRNA downstream 323312 8378333 ~ 8397041 (+) True AMCG00012006
AMCG00012005 mRNA downstream 343005 8398026 ~ 8401203 (+) True AMCG00012005
AMCG00012004 mRNA downstream 370999 8426020 ~ 8428680 (+) True AMCG00012004
AMCG00012007 mRNA downstream 409184 8464205 ~ 8468828 (+) True AMCG00012007
AMCG00012008 mRNA downstream 454990 8510011 ~ 8520648 (+) True AMCG00012008
TU167865 other upstream 19515 8028063 ~ 8032609 (+) False AMCG00011993
TU167842 other upstream 81206 7960698 ~ 7970918 (+) False AMCG00011986
TU167660 other upstream 485778 7565387 ~ 7566346 (+) False AMCG00011971
TU167659 other upstream 486096 7564808 ~ 7566028 (+) False AMCG00011971
TU167656 other upstream 543373 7505082 ~ 7508751 (+) True G133667
TU168052 other downstream 328092 8383113 ~ 8387097 (+) False AMCG00012006
TU168076 other downstream 462993 8518014 ~ 8519026 (+) False AMCG00012008
TU168082 other downstream 506021 8561042 ~ 8563214 (+) True G133974
TU168537 other downstream 1596328 9651349 ~ 9653234 (+) True G134291
TU168543 other downstream 1601336 9656357 ~ 9656727 (+) True G134295

Expression Profile