RNA id: TU167885



Basic Information


Item Value
RNA id TU167885
length 303
lncRNA type inter_gene
GC content 0.42
exon number 3
gene id G133833
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8120899 ~ 8124699 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCAACTTCCATTAGTGGTTGTGGGGGAGGAACGGGGATGGTATATAAAGCAGATCTCTTCACCAGAGCAGCACAGAGTGGTTCCAAAGAAACTCAGCATCCTGATCAACCTACCACAAACAACTTTTCATTCagGTGCTGGTGTTTACAGATAGTGTGAATTGAGTGGAGAAGTCTACAGCTTGGTGTTGTTATGGCGAGTCATACCTCAATTAATACCTCCAAACAAAAGGGATCTAAGTGTGATACAAGGTAAGATTCCTGTTACAACCTGCATTTATACCTGCATGTTTATTTGCTATGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU167877 lncRNA upstream 3650 8062593 ~ 8117249 (+) True G133825
TU167884 lncRNA upstream 20462 8079755 ~ 8100437 (+) True G133832
TU167871 lncRNA upstream 117387 8002780 ~ 8003512 (+) True G133820
TU167857 lncRNA upstream 194673 7925136 ~ 7926226 (+) False AMCG00011987
TU167816 lncRNA upstream 277428 7830564 ~ 7843471 (+) True G133783
TU168009 lncRNA downstream 72120 8196819 ~ 8197029 (+) True G133921
TU168042 lncRNA downstream 151676 8276375 ~ 8276580 (+) True G133947
TU168067 lncRNA downstream 324344 8449043 ~ 8578268 (+) True G133961
TU168143 lncRNA downstream 494808 8619507 ~ 8623220 (+) True G134018
TU168146 lncRNA downstream 499519 8624218 ~ 8627183 (+) True G134019
AMCG00011993 mRNA upstream 83218 8029486 ~ 8037681 (+) True AMCG00011993
AMCG00011994 mRNA upstream 95838 8020804 ~ 8025061 (+) True AMCG00011994
AMCG00011992 mRNA upstream 104012 7999228 ~ 8016887 (+) True AMCG00011992
AMCG00011986 mRNA upstream 144802 7970457 ~ 7976097 (+) True AMCG00011986
AMCG00011985 mRNA upstream 165886 7931795 ~ 7955013 (+) True AMCG00011985
AMCG00012006 mRNA downstream 253634 8378333 ~ 8397041 (+) True AMCG00012006
AMCG00012005 mRNA downstream 273327 8398026 ~ 8401203 (+) True AMCG00012005
AMCG00012004 mRNA downstream 301321 8426020 ~ 8428680 (+) True AMCG00012004
AMCG00012007 mRNA downstream 339506 8464205 ~ 8468828 (+) True AMCG00012007
AMCG00012008 mRNA downstream 385312 8510011 ~ 8520648 (+) True AMCG00012008
TU167873 other upstream 65878 8052124 ~ 8055021 (+) True G133822
TU167865 other upstream 88290 8028063 ~ 8032609 (+) False AMCG00011993
TU167842 other upstream 149981 7960698 ~ 7970918 (+) False AMCG00011986
TU167660 other upstream 554553 7565387 ~ 7566346 (+) False AMCG00011971
TU167659 other upstream 554871 7564808 ~ 7566028 (+) False AMCG00011971
TU168052 other downstream 258414 8383113 ~ 8387097 (+) False AMCG00012006
TU168076 other downstream 393315 8518014 ~ 8519026 (+) False AMCG00012008
TU168082 other downstream 436343 8561042 ~ 8563214 (+) True G133974
TU168537 other downstream 1526650 9651349 ~ 9653234 (+) True G134291
TU168543 other downstream 1531658 9656357 ~ 9656727 (+) True G134295

Expression Profile