RNA id: TU168082



Basic Information


Item Value
RNA id TU168082
length 399
RNA type TUCP
GC content 0.51
exon number 4
gene id G133974
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8561042 ~ 8563214 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CACTAATGTGAGAAACTGAAAGTGTTTCTGTGCATCTCCATTTTAAAGAAGATATCAgTGACATGATTGGCTCTCTTACAAACGCACTGGATTTGAACTTGTGTCGGGATCAGTTATGTGTCTGTGCTAAACATGGAACCTGCACGAAATGTTGTGGCCTTGATCGTGGCTTTGTCTGCTGGATATTGTGTGCCGATGCCGTGGAGGGACCCCTCAGCACCTTCTGACACCAGACTGGCAGGAGATCACTTGGAACTTGTGGTCCCATCAGCCTCTCTGGTTGTCAATATGGGCTGCGACACTGTCCTCCCCTGCCAGCTCTCTCCCAGTGTCAGCACTGCAGCCATGGAGGTGCGGTGGTTCAGAGAGACGCTCACTGAGCCCATCCACCAGTATGAG

Function


GO: NA

KEGG:

id description
ko04114 Oocyte meiosis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168042 lncRNA upstream 284462 8276375 ~ 8276580 (+) True G133947
TU168009 lncRNA upstream 364013 8196819 ~ 8197029 (+) True G133921
TU167885 lncRNA upstream 436343 8120899 ~ 8124699 (+) True G133833
TU167877 lncRNA upstream 443793 8062593 ~ 8117249 (+) True G133825
TU168143 lncRNA downstream 56293 8619507 ~ 8623220 (+) True G134018
TU168146 lncRNA downstream 61004 8624218 ~ 8627183 (+) True G134019
TU168166 lncRNA downstream 136197 8699411 ~ 8700618 (+) True G134033
TU168167 lncRNA downstream 139135 8702349 ~ 8702598 (+) True G134034
TU168168 lncRNA downstream 140535 8703749 ~ 8703968 (+) True G134035
AMCG00012008 mRNA upstream 40394 8510011 ~ 8520648 (+) True AMCG00012008
AMCG00012007 mRNA upstream 92214 8464205 ~ 8468828 (+) True AMCG00012007
AMCG00012004 mRNA upstream 132362 8426020 ~ 8428680 (+) True AMCG00012004
AMCG00012005 mRNA upstream 159839 8398026 ~ 8401203 (+) True AMCG00012005
AMCG00012006 mRNA upstream 164001 8378333 ~ 8397041 (+) True AMCG00012006
AMCG00012010 mRNA downstream 23916 8587130 ~ 8587981 (+) True AMCG00012010
AMCG00012011 mRNA downstream 31802 8595016 ~ 8601876 (+) True AMCG00012011
AMCG00012016 mRNA downstream 107275 8670489 ~ 8670824 (+) True AMCG00012016
AMCG00012015 mRNA downstream 115690 8678904 ~ 8698447 (+) True AMCG00012015
AMCG00012014 mRNA downstream 163609 8726823 ~ 8730941 (+) True AMCG00012014
TU168076 other upstream 42016 8518014 ~ 8519026 (+) False AMCG00012008
TU168052 other upstream 173945 8383113 ~ 8387097 (+) False AMCG00012006
TU167873 other upstream 506021 8052124 ~ 8055021 (+) True G133822
TU167865 other upstream 528433 8028063 ~ 8032609 (+) False AMCG00011993
TU167842 other upstream 590124 7960698 ~ 7970918 (+) False AMCG00011986
TU168537 other downstream 1088135 9651349 ~ 9653234 (+) True G134291
TU168543 other downstream 1093143 9656357 ~ 9656727 (+) True G134295
TU168605 other downstream 1289676 9852890 ~ 9867143 (+) True G134338
TU168607 other downstream 1372712 9935926 ~ 9936411 (+) True G134340
TU168629 other downstream 1470972 10034186 ~ 10034693 (+) True G134357

Expression Profile