RNA id: TU168168



Basic Information


Item Value
RNA id TU168168
length 220
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G134035
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8703749 ~ 8703968 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCTTTTGTCCGTCATGCATTtcgctttattttatttctttgcaagACTGACCCTGCGATACCCACCGCCAACTGGTCTCCCGTCGCAGGCATGAGCAAAGCTACTGGGATGATCTTAGAGAAGATGACACATACACTCGTGTGTTATTAAATCgctatgttgttttttcccctctcgcCAACCCCAGGGCGGGAGAAACAGGCTGTCGCTTGGCACTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168167 lncRNA upstream 1151 8702349 ~ 8702598 (+) True G134034
TU168166 lncRNA upstream 3131 8699411 ~ 8700618 (+) True G134033
TU168146 lncRNA upstream 76566 8624218 ~ 8627183 (+) True G134019
TU168143 lncRNA upstream 80529 8619507 ~ 8623220 (+) True G134018
TU168067 lncRNA upstream 125481 8449043 ~ 8578268 (+) True G133961
TU168209 lncRNA downstream 98555 8802523 ~ 8802878 (+) True G134068
TU168230 lncRNA downstream 184749 8888717 ~ 8888946 (+) True G134084
TU168296 lncRNA downstream 490594 9194562 ~ 9195917 (+) True G134141
TU168335 lncRNA downstream 576917 9280885 ~ 9309931 (+) False AMCG00012043
TU168426 lncRNA downstream 697486 9401454 ~ 9414917 (+) True G134222
AMCG00012015 mRNA upstream 5302 8678904 ~ 8698447 (+) True AMCG00012015
AMCG00012016 mRNA upstream 32925 8670489 ~ 8670824 (+) True AMCG00012016
AMCG00012011 mRNA upstream 101873 8595016 ~ 8601876 (+) True AMCG00012011
AMCG00012010 mRNA upstream 115768 8587130 ~ 8587981 (+) True AMCG00012010
AMCG00012008 mRNA upstream 183101 8510011 ~ 8520648 (+) True AMCG00012008
AMCG00012014 mRNA downstream 22855 8726823 ~ 8730941 (+) True AMCG00012014
AMCG00012019 mRNA downstream 101133 8805101 ~ 8839751 (+) True AMCG00012019
AMCG00012023 mRNA downstream 144358 8848326 ~ 8866791 (+) True AMCG00012023
AMCG00012022 mRNA downstream 179661 8883629 ~ 8885897 (+) True AMCG00012022
AMCG00012024 mRNA downstream 198328 8902296 ~ 8910971 (+) True AMCG00012024
TU168082 other upstream 140535 8561042 ~ 8563214 (+) True G133974
TU168076 other upstream 184723 8518014 ~ 8519026 (+) False AMCG00012008
TU168052 other upstream 316652 8383113 ~ 8387097 (+) False AMCG00012006
TU167873 other upstream 648728 8052124 ~ 8055021 (+) True G133822
TU167865 other upstream 671140 8028063 ~ 8032609 (+) False AMCG00011993
TU168537 other downstream 947381 9651349 ~ 9653234 (+) True G134291
TU168543 other downstream 952389 9656357 ~ 9656727 (+) True G134295
TU168605 other downstream 1148922 9852890 ~ 9867143 (+) True G134338
TU168607 other downstream 1231958 9935926 ~ 9936411 (+) True G134340
TU168629 other downstream 1330218 10034186 ~ 10034693 (+) True G134357

Expression Profile