Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU168577 |
| length | 993 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G134326 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 9769657 ~ 9770685 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04064 | NF-kappa B signaling pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU168553 | lncRNA | upstream | 90555 | 9676778 ~ 9679102 (+) | True | G134305 |
| TU168540 | lncRNA | upstream | 115057 | 9653852 ~ 9654600 (+) | True | G134292 |
| TU168528 | lncRNA | upstream | 123213 | 9646026 ~ 9646444 (+) | True | G134284 |
| TU168499 | lncRNA | upstream | 197939 | 9567280 ~ 9571718 (+) | True | G134259 |
| TU168454 | lncRNA | upstream | 230683 | 9534314 ~ 9538974 (+) | True | G134236 |
| TU168586 | lncRNA | downstream | 76837 | 9847522 ~ 9923017 (+) | True | G134335 |
| TU168614 | lncRNA | downstream | 116173 | 9886858 ~ 9945740 (+) | True | G134346 |
| TU168615 | lncRNA | downstream | 116173 | 9886858 ~ 10428524 (+) | False | G134346 |
| TU168608 | lncRNA | downstream | 157227 | 9927912 ~ 9946489 (+) | True | G134341 |
| TU168619 | lncRNA | downstream | 187666 | 9958351 ~ 10180707 (+) | False | G134350 |
| AMCG00012069 | mRNA | upstream | 50460 | 9712222 ~ 9719197 (+) | True | AMCG00012069 |
| AMCG00012057 | mRNA | upstream | 96296 | 9659749 ~ 9673361 (+) | True | AMCG00012057 |
| AMCG00012067 | mRNA | upstream | 126326 | 9635496 ~ 9643331 (+) | True | AMCG00012067 |
| AMCG00012056 | mRNA | upstream | 224672 | 9542014 ~ 9544985 (+) | True | AMCG00012056 |
| AMCG00012055 | mRNA | upstream | 235416 | 9508741 ~ 9534241 (+) | True | AMCG00012055 |
| AMCG00012075 | mRNA | downstream | 209205 | 9979890 ~ 9999729 (+) | True | AMCG00012075 |
| AMCG00012076 | mRNA | downstream | 229053 | 9999738 ~ 10004091 (+) | True | AMCG00012076 |
| AMCG00012074 | mRNA | downstream | 244159 | 10014844 ~ 10016191 (+) | True | AMCG00012074 |
| AMCG00012079 | mRNA | downstream | 296871 | 10067556 ~ 10074742 (+) | True | AMCG00012079 |
| AMCG00012078 | mRNA | downstream | 327463 | 10098148 ~ 10100456 (+) | True | AMCG00012078 |
| TU168543 | other | upstream | 112930 | 9656357 ~ 9656727 (+) | True | G134295 |
| TU168537 | other | upstream | 116423 | 9651349 ~ 9653234 (+) | True | G134291 |
| TU168082 | other | upstream | 1206443 | 8561042 ~ 8563214 (+) | True | G133974 |
| TU168076 | other | upstream | 1250631 | 8518014 ~ 8519026 (+) | False | AMCG00012008 |
| TU168052 | other | upstream | 1382560 | 8383113 ~ 8387097 (+) | False | AMCG00012006 |
| TU168605 | other | downstream | 82205 | 9852890 ~ 9867143 (+) | True | G134338 |
| TU168607 | other | downstream | 165241 | 9935926 ~ 9936411 (+) | True | G134340 |
| TU168629 | other | downstream | 263501 | 10034186 ~ 10034693 (+) | True | G134357 |
| TU168638 | other | downstream | 363342 | 10134027 ~ 10134592 (+) | True | G134365 |
| TU168639 | other | downstream | 369269 | 10139954 ~ 10140457 (+) | True | G134366 |
