RNA id: TU168676


Basic Information

Item Value
RNA id TU168676
length 214
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G134396
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9792310 ~ 9799446 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

NNAGCAGCTACTGGATGCACTGGGTTAGACAGGCTCCTGGGAAGGGGCTGGAATGGCTaggaaacattaaatatgatgGTAGTAGCAAGTATTATGCCCAGTCAGTTCAAGGCAGATTCACCATCTCCAGAGACAACTCCAAAAGCACactgtatttacaaatgaacagcctgaagactgaagacagcgctgtgtattactgtgcaaAGGACTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU168546 lncRNA downstream 135665 9656356 ~ 9656645 (-) True G134298
TU168438 lncRNA downstream 375852 9414316 ~ 9416458 (-) True G134226
TU168298 lncRNA downstream 601018 9154436 ~ 9191292 (-) True G134143
TU168210 lncRNA downstream 989324 8802407 ~ 8802986 (-) True G134069
TU168111 lncRNA downstream 1308653 8430988 ~ 8483657 (-) True G133997
TU168678 lncRNA upstream 10352 9809798 ~ 10182061 (-) False G134397
TU168689 lncRNA upstream 53455 9852901 ~ 10344049 (-) False G134402
TU168692 lncRNA upstream 53455 9852901 ~ 9867138 (-) False G134402
TU168690 lncRNA upstream 128466 9927912 ~ 10346189 (-) False G134402
TU168696 lncRNA upstream 136654 9936100 ~ 9946489 (-) True G134405
AMCG00012070 mRNA downstream 18269 9768512 ~ 9774041 (-) True AMCG00012070
AMCG00012071 mRNA downstream 43758 9748269 ~ 9748552 (-) True AMCG00012071
AMCG00012059 mRNA downstream 103629 9682673 ~ 9688681 (-) True AMCG00012059
AMCG00012063 mRNA downstream 136283 9651257 ~ 9656027 (-) True AMCG00012063
AMCG00012061 mRNA downstream 142291 9645594 ~ 9650019 (-) True AMCG00012061
AMCG00012072 mRNA upstream 86964 9886410 ~ 9890746 (-) True AMCG00012072
AMCG00012073 mRNA upstream 171547 9970993 ~ 9975251 (-) True AMCG00012073
AMCG00012077 mRNA upstream 245174 10044620 ~ 10061469 (-) True AMCG00012077
AMCG00012080 mRNA upstream 281270 10080716 ~ 10092937 (-) True AMCG00012080
AMCG00012081 mRNA upstream 406026 10205472 ~ 10206762 (-) True AMCG00012081
TU168674 other downstream 962 9790841 ~ 9791348 (-) True G134395
TU168522 other downstream 166709 9612910 ~ 9625601 (-) False AMCG00012058
TU168523 other downstream 166709 9612910 ~ 9625601 (-) False AMCG00012058
TU168524 other downstream 166709 9612910 ~ 9625601 (-) False AMCG00012058
TU168464 other downstream 253418 9535268 ~ 9538892 (-) True G134244
TU168683 other upstream 48095 9847541 ~ 9848106 (-) True G134400
TU168706 other upstream 156405 9955851 ~ 9956360 (-) True G134411
TU168694 other upstream 158799 9958245 ~ 9958873 (-) True G134403
TU168679 other upstream 351035 10150481 ~ 10244924 (-) False G134397
TU168732 other upstream 355219 10154665 ~ 10155208 (-) True G134435

Expression Profile