RNA id: TU168697


Basic Information

Item Value
RNA id TU168697
length 455
RNA type TUCP
GC content 0.45
exon number 3
gene id G134406
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10176920 ~ 10223219 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CACCTGTTAAACATGTGGCCGCTATAATAATTGCAATTAGACTGGCCATTGTTTGAGGTTGAGACTGAAGTCTCATTACTGCAACCTCAACCTCAAACAATGGCCAGTCTAACTGCAATTATTATAGCGGCCACATGTTTAACAGGTGTTCAGTCCCAGATCGTGCTGACTGAGTCTGAGGCAGCAGTTAAAAAGCCCGGAGAATCCCACACACTGTCCTGTACAGCCTCAGGATTTACATTCAGCAGCTACTGGATGGGCTGGGTTAGACAGGCTCCTGGGAAGGGGCTGGAATGGGTGGCTTCTACTGATTTTGGTGGTAGTACCAAACGTTATGCTCAGTCATTTCAAGGCAGATTCATTATCTCCAGAGACAACTCAAAAAGCAAACTGTATTTACAAATTAACAGCCTGAAGACTGAAGACAGcgctgtgtattactgtgcaaAGGACTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU168696 lncRNA downstream 230431 9936100 ~ 9946489 (-) True G134405
TU168692 lncRNA downstream 309782 9852901 ~ 9867138 (-) False G134402
TU168676 lncRNA downstream 377474 9792310 ~ 9799446 (-) True G134396
TU168546 lncRNA downstream 520275 9656356 ~ 9656645 (-) True G134298
TU168438 lncRNA downstream 760462 9414316 ~ 9416458 (-) True G134226
TU168743 lncRNA upstream 2408 10225627 ~ 10287129 (-) True G134443
TU168754 lncRNA upstream 80350 10303569 ~ 10306027 (-) True G134451
TU168688 lncRNA upstream 121843 10345062 ~ 10347725 (-) True G134402
TU169026 lncRNA upstream 744057 10967276 ~ 10971088 (-) False G134648
TU169027 lncRNA upstream 744057 10967276 ~ 10982791 (-) True G134648
AMCG00012080 mRNA downstream 83983 10080716 ~ 10092937 (-) True AMCG00012080
AMCG00012077 mRNA downstream 115451 10044620 ~ 10061469 (-) True AMCG00012077
AMCG00012073 mRNA downstream 201669 9970993 ~ 9975251 (-) True AMCG00012073
AMCG00012072 mRNA downstream 286174 9886410 ~ 9890746 (-) True AMCG00012072
AMCG00012070 mRNA downstream 402879 9768512 ~ 9774041 (-) True AMCG00012070
AMCG00012085 mRNA upstream 143870 10367089 ~ 10436690 (-) True AMCG00012085
AMCG00012093 mRNA upstream 342991 10566210 ~ 10582453 (-) True AMCG00012093
AMCG00012090 mRNA upstream 364363 10587582 ~ 10591854 (-) True AMCG00012090
AMCG00012091 mRNA upstream 369663 10592882 ~ 10596371 (-) True AMCG00012091
AMCG00012092 mRNA upstream 411371 10634590 ~ 10650309 (-) True AMCG00012092
TU168732 other downstream 21712 10154665 ~ 10155208 (-) True G134435
TU168694 other downstream 218047 9958245 ~ 9958873 (-) True G134403
TU168706 other downstream 220560 9955851 ~ 9956360 (-) True G134411
TU168683 other downstream 328814 9847541 ~ 9848106 (-) True G134400
TU168674 other downstream 385572 9790841 ~ 9791348 (-) True G134395
TU168677 other upstream 21202 10244421 ~ 10244924 (-) True G134397
TU168746 other upstream 27052 10250271 ~ 10251115 (-) True G134445
TU168748 other upstream 32307 10255526 ~ 10256038 (-) True G134447
TU168910 other upstream 506556 10729775 ~ 10811881 (-) True G134581
TU169020 other upstream 711713 10934932 ~ 10961871 (-) False AMCG00012111

Expression Profile