RNA id: TU169293



Basic Information


Item Value
RNA id TU169293
length 304
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G134853
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 11766072 ~ 11766416 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAGGAGTTGGTTTGAGGACTGAGAGTGGGCATGTCCTGTGACACTGAGGTCTATATTAAGTGCAGTGGGGTCCAGTAGAGTGGTGGAGAGTCAGTGCTCAGTGTCCAGTGAGCTGCAGTAGTTGTTGAGAGTCACTGCTCAGTGTCCAGTGAGCTGCAGTAGTTGTTGAGAGTCAGTCCTCAGTGTCCAGTGAGCTGCAGTAGTTGTTGAGAGTCAGTGCTCTGTGTCCAGTGAGAATCCAGGAGGGTCAAGATGCTTCTCCTGCAACTGCTGTTTGGGGTCCTGCTCCTGAACACCTATGAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU169288 lncRNA downstream 105767 11659721 ~ 11660305 (-) True G134849
TU169280 lncRNA downstream 161915 11603523 ~ 11604157 (-) True G134844
TU169245 lncRNA downstream 365371 11395960 ~ 11400701 (-) True G134819
TU169223 lncRNA downstream 418262 11330466 ~ 11347810 (-) False G134803
TU169027 lncRNA downstream 783281 10967276 ~ 10982791 (-) True G134648
TU169351 lncRNA upstream 247936 12014352 ~ 12017558 (-) True G134899
TU169392 lncRNA upstream 351924 12118340 ~ 12118592 (-) True G134936
TU169465 lncRNA upstream 500187 12266603 ~ 12266826 (-) True G135002
TU169471 lncRNA upstream 596119 12362535 ~ 12362840 (-) True G135008
TU169716 lncRNA upstream 800257 12566673 ~ 12589807 (-) True G135148
AMCG00012149 mRNA downstream 108940 11656076 ~ 11657132 (-) True AMCG00012149
AMCG00012141 mRNA downstream 225982 11536026 ~ 11540090 (-) True AMCG00012141
AMCG00012139 mRNA downstream 377338 11382279 ~ 11388734 (-) True AMCG00012139
AMCG00012132 mRNA downstream 415135 11347488 ~ 11350937 (-) True AMCG00012132
AMCG00012129 mRNA downstream 434791 11322207 ~ 11331281 (-) True AMCG00012129
AMCG00012154 mRNA upstream 10025 11776441 ~ 11789617 (-) True AMCG00012154
AMCG00012157 mRNA upstream 41583 11807999 ~ 11813611 (-) True AMCG00012157
AMCG00012156 mRNA upstream 76652 11843068 ~ 11866778 (-) True AMCG00012156
AMCG00012158 mRNA upstream 104821 11871237 ~ 11885827 (-) True AMCG00012158
AMCG00012160 mRNA upstream 123935 11890351 ~ 11896617 (-) True AMCG00012160
TU169224 other downstream 379093 11330466 ~ 11386979 (-) True G134803
TU169020 other downstream 804201 10934932 ~ 10961871 (-) False AMCG00012111
TU168910 other downstream 954191 10729775 ~ 10811881 (-) True G134581
TU168748 other downstream 1510034 10255526 ~ 10256038 (-) True G134447
TU168746 other downstream 1514957 10250271 ~ 10251115 (-) True G134445
TU169384 other upstream 307588 12074004 ~ 12101973 (-) True AMCG00012171
TU169390 other upstream 352864 12119280 ~ 12119632 (-) False AMCG00012170
TU169437 other upstream 425139 12191555 ~ 12213799 (-) True AMCG00012174
TU169436 other upstream 436346 12202762 ~ 12213799 (-) False AMCG00012174
TU169444 other upstream 454789 12221205 ~ 12223185 (-) True G134981

Expression Profile