Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU169517 |
| length | 421 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 3 |
| gene id | G135028 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 12692668 ~ 12693815 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko03410 | Base excision repair |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU169488 | lncRNA | upstream | 43856 | 12613973 ~ 12648812 (+) | False | G135025 |
| TU169519 | lncRNA | upstream | 44055 | 12612165 ~ 12648613 (+) | True | G135030 |
| TU169489 | lncRNA | upstream | 46588 | 12613973 ~ 12646080 (+) | False | G135025 |
| TU169511 | lncRNA | upstream | 60608 | 12566212 ~ 12632060 (+) | False | G135026 |
| TU169497 | lncRNA | upstream | 60858 | 12588024 ~ 12631810 (+) | False | G135026 |
| TU169522 | lncRNA | downstream | 8508 | 12702323 ~ 12724194 (+) | True | AMCG00012191 |
| TU169523 | lncRNA | downstream | 26047 | 12719862 ~ 12721164 (+) | True | G135033 |
| TU169528 | lncRNA | downstream | 90273 | 12784088 ~ 12786060 (+) | True | G135038 |
| TU169539 | lncRNA | downstream | 142437 | 12836252 ~ 12840315 (+) | True | G135045 |
| TU169548 | lncRNA | downstream | 179403 | 12873218 ~ 12895581 (+) | True | G135051 |
| AMCG00012192 | mRNA | upstream | 38352 | 12651153 ~ 12654316 (+) | True | AMCG00012192 |
| AMCG00012198 | mRNA | upstream | 69587 | 12621011 ~ 12623081 (+) | True | AMCG00012198 |
| AMCG00012186 | mRNA | upstream | 101296 | 12588930 ~ 12591372 (+) | True | AMCG00012186 |
| AMCG00012190 | mRNA | upstream | 123668 | 12566641 ~ 12569000 (+) | True | AMCG00012190 |
| AMCG00012189 | mRNA | upstream | 144024 | 12541835 ~ 12548644 (+) | True | AMCG00012189 |
| AMCG00012191 | mRNA | downstream | 21181 | 12714996 ~ 12721624 (+) | False | AMCG00012191 |
| AMCG00012193 | mRNA | downstream | 64206 | 12758021 ~ 12758746 (+) | True | AMCG00012193 |
| AMCG00012194 | mRNA | downstream | 68809 | 12762624 ~ 12763676 (+) | True | AMCG00012194 |
| AMCG00012199 | mRNA | downstream | 93585 | 12787400 ~ 12788020 (+) | True | AMCG00012199 |
| AMCG00012200 | mRNA | downstream | 96712 | 12790527 ~ 12799451 (+) | True | AMCG00012200 |
| TU169491 | other | upstream | 46096 | 12613973 ~ 12646572 (+) | True | G135025 |
| TU169428 | other | upstream | 500260 | 12191555 ~ 12192408 (+) | True | G134968 |
| TU169416 | other | upstream | 511348 | 12181061 ~ 12181320 (+) | True | G134958 |
| TU169413 | other | upstream | 519866 | 12172538 ~ 12172802 (+) | True | G134955 |
| TU169350 | other | upstream | 661178 | 12030897 ~ 12031490 (+) | True | G134898 |
| TU169494 | other | downstream | 15075 | 12708890 ~ 12716115 (+) | False | G135026 |
| TU169504 | other | downstream | 21181 | 12714996 ~ 12716115 (+) | False | G135026 |
| TU169527 | other | downstream | 76968 | 12770783 ~ 12777157 (+) | True | G135037 |
| TU169530 | other | downstream | 91393 | 12785208 ~ 12786060 (+) | False | G135038 |
| TU169576 | other | downstream | 274562 | 12968377 ~ 12974053 (+) | True | G135070 |
