RNA id: TU170267



Basic Information


Item Value
RNA id TU170267
length 654
RNA type TUCP
GC content 0.55
exon number 2
gene id G135541
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14375633 ~ 14377651 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGGGGGTTCTGATGGGCGTCAGTGTGCAGACTTGGCTAAAACATGGGTCGACCCGAGTCAAGCGCCAAAGGAAACATAATGTGCTGGCGGATAAGGAAAACAATGTGTGCGCTCACGATCGGCTCACCGGTGACCAGGCCCTCTGCCGTTGCCAGGTGCAGCACGGTGTCGTCGCTGATCGGCCAGTCAGGGAGCTGCACCACGATGCCCCGAAGCCCGcccagctcctgcagctcctggTGGATGGCCGGCCCCGATTCATTGTACTCCCACAGCTGGTTACGGTAACCCAGGGCATCGCCAGCTGCACTGAGCAACATGGCAGCCTTGTAGTGATCCAGAGTGGGGGGGCCTGTCCATCGTGAGGCTGCTCTCCCGGGCCGCTGGATCTCGCTTCGGACGGCGACTGAAATCCACTCCGCGGCTTCGGCCCTTCGCCTCTTTGTGCCCGTTTACTGATCCGCCGATTCAGCGTCTCCGCTCATCACATGACCTTCAGTCTCTCCCCTCCCCGTTCATTCTTCACTTATTTAATTCAGTGCCAAAAACAAATATCGTCTTTCAAGATTCATGTTAATCTTTGgttacagattatattttacGTTGTTACTAGAATCTGAATAGGCCGACATTATACAGTTGCGTAATAGTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU170270 lncRNA upstream 1688 14373040 ~ 14373945 (+) True G135542
TU170265 lncRNA upstream 7296 14368049 ~ 14368337 (+) True G135540
TU170228 lncRNA upstream 143370 14226990 ~ 14232263 (+) True G135506
TU170089 lncRNA upstream 198826 14173947 ~ 14176807 (+) False AMCG00012262
TU170057 lncRNA upstream 419328 13927988 ~ 13956305 (+) True G135366
TU170275 lncRNA downstream 21 14377672 ~ 14378695 (+) True G135544
TU170321 lncRNA downstream 140565 14518216 ~ 14521605 (+) True G135575
TU170332 lncRNA downstream 157873 14535524 ~ 14538864 (+) True G135582
TU170347 lncRNA downstream 185925 14563576 ~ 14576998 (+) True G135594
TU170353 lncRNA downstream 192724 14570375 ~ 14610737 (+) True G135595
AMCG00012266 mRNA upstream 3037 14337873 ~ 14372596 (+) True AMCG00012266
AMCG00012273 mRNA upstream 61197 14312287 ~ 14314436 (+) True AMCG00012273
AMCG00012268 mRNA upstream 78974 14293311 ~ 14296659 (+) False AMCG00012268
AMCG00012263 mRNA upstream 175638 14186727 ~ 14199995 (+) True AMCG00012263
AMCG00012262 mRNA upstream 192466 14173913 ~ 14183167 (+) True AMCG00012262
AMCG00012267 mRNA downstream 10387 14388038 ~ 14389607 (+) True AMCG00012267
AMCG00012276 mRNA downstream 21462 14399113 ~ 14410440 (+) True AMCG00012276
AMCG00012274 mRNA downstream 38356 14416007 ~ 14423640 (+) True AMCG00012274
AMCG00012277 mRNA downstream 50308 14427959 ~ 14434886 (+) True AMCG00012277
AMCG00012278 mRNA downstream 61057 14438708 ~ 14443094 (+) True AMCG00012278
TU170232 other upstream 80218 14246763 ~ 14295415 (+) True AMCG00012268
TU170041 other upstream 279836 14062237 ~ 14095797 (+) True AMCG00012253
TU170021 other upstream 520714 13850378 ~ 13854919 (+) True AMCG00012247
TU169982 other upstream 561877 13807213 ~ 13813756 (+) False AMCG00012245
TU169904 other upstream 789717 13584270 ~ 13585916 (+) True G135264
TU170274 other downstream 21 14377672 ~ 14378695 (+) False G135544
TU170281 other downstream 10424 14388075 ~ 14389685 (+) False AMCG00012267
TU170305 other downstream 57314 14434965 ~ 14435728 (+) True G135566
TU170313 other downstream 206473 14584124 ~ 14585770 (+) True G135573
TU170413 other downstream 332593 14710244 ~ 14712641 (+) False AMCG00012294

Expression Profile