Item | Value |
---|---|
RNA id | TU170591 |
length | 328 |
lncRNA type | sense_over |
GC content | 0.42 |
exon number | 2 |
gene id | G135779 |
representative | False |
Item | Value |
---|---|
chromosome id | CM030138.1 |
NCBI id | CM030138.1 |
chromosome length | 24262032 |
location | 15879134 ~ 15900621 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU170578 | lncRNA | upstream | 67013 | 15811913 ~ 15812121 (+) | True | G135768 |
TU170447 | lncRNA | upstream | 72481 | 15802429 ~ 15806653 (+) | True | G135666 |
TU170557 | lncRNA | upstream | 189796 | 15684478 ~ 15689338 (+) | True | AMCG00012308 |
TU170523 | lncRNA | upstream | 521409 | 15351885 ~ 15357725 (+) | True | G135721 |
TU170453 | lncRNA | upstream | 642981 | 15232787 ~ 15236153 (+) | False | AMCG00012300 |
TU170939 | lncRNA | downstream | 202273 | 16102894 ~ 16103304 (+) | True | G136025 |
TU170940 | lncRNA | downstream | 231210 | 16131831 ~ 16136715 (+) | True | AMCG00012324 |
TU170957 | lncRNA | downstream | 271118 | 16171739 ~ 16172095 (+) | True | G136040 |
TU170969 | lncRNA | downstream | 293354 | 16193975 ~ 16196114 (+) | True | G136051 |
TU171136 | lncRNA | downstream | 637441 | 16538062 ~ 16539149 (+) | True | G136177 |
AMCG00012310 | mRNA | upstream | 63420 | 15764029 ~ 15815714 (+) | True | AMCG00012310 |
AMCG00012308 | mRNA | upstream | 189844 | 15684507 ~ 15689290 (+) | False | AMCG00012308 |
AMCG00012309 | mRNA | upstream | 199871 | 15643156 ~ 15679263 (+) | True | AMCG00012309 |
AMCG00012307 | mRNA | upstream | 348755 | 15523512 ~ 15530379 (+) | True | AMCG00012307 |
AMCG00012302 | mRNA | upstream | 404608 | 15471051 ~ 15474526 (+) | False | AMCG00012302 |
AMCG00012316 | mRNA | downstream | 41011 | 15941632 ~ 15984389 (+) | True | AMCG00012316 |
AMCG00012317 | mRNA | downstream | 86438 | 15987059 ~ 16057103 (+) | True | AMCG00012317 |
AMCG00012321 | mRNA | downstream | 157232 | 16057853 ~ 16100861 (+) | True | AMCG00012321 |
AMCG00012324 | mRNA | downstream | 204284 | 16104905 ~ 16142641 (+) | False | AMCG00012324 |
AMCG00012320 | mRNA | downstream | 242029 | 16142650 ~ 16155119 (+) | True | AMCG00012320 |
TU170455 | other | upstream | 255253 | 15119725 ~ 15623881 (+) | True | G135670 |
TU170550 | other | upstream | 315298 | 15559904 ~ 15563836 (+) | True | G135744 |
TU170537 | other | upstream | 399585 | 15452069 ~ 15479549 (+) | True | AMCG00012302 |
TU170424 | other | upstream | 869331 | 14988298 ~ 15009803 (+) | True | G135649 |
TU170413 | other | upstream | 1166493 | 14710244 ~ 14712641 (+) | False | AMCG00012294 |
TU170595 | other | downstream | 10627 | 15911248 ~ 15930848 (+) | True | G135781 |
TU170961 | other | downstream | 275778 | 16176399 ~ 16182668 (+) | False | AMCG00012318 |
TU171007 | other | downstream | 349627 | 16250248 ~ 16259332 (+) | True | G136076 |
TU171045 | other | downstream | 493078 | 16393699 ~ 16432813 (+) | True | AMCG00012338 |
TU171165 | other | downstream | 743136 | 16643757 ~ 16648562 (+) | True | AMCG00012348 |